PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M01177.1.p | ||||||||
Common Name | LOC105968368, MIMGU_mgv1a027127mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | Dof | ||||||||
Protein Properties | Length: 294aa MW: 32314.5 Da PI: 6.0259 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 107.9 | 5.2e-34 | 51 | 106 | 4 | 59 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 lkcprC stntkfCyynny+ sqPr+fCk+C+r+WtkGG+lr vP+Gggr++++ Migut.M01177.1.p 51 PPLKCPRCASTNTKFCYYNNYNKSQPRHFCKSCKRHWTKGGTLRTVPLGGGRKNKR 106 6789**********************************************977665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 6.0E-22 | 47 | 106 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.0E-30 | 52 | 105 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 26.729 | 53 | 107 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 55 | 91 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence Send to blast |
MGLSSEHVSA DHRDDIIQGF DWGGQRSSSG APPPELSKPP PIRRPQQSSE PPLKCPRCAS 60 TNTKFCYYNN YNKSQPRHFC KSCKRHWTKG GTLRTVPLGG GRKNKRPKIS NPSTTTAAVH 120 QEDDKPNNFP STILYQSLIN NATSSPPLLH QTRDSCTNII IGINGGADST TISTGLNINN 180 NPNAEFHEFT SFDMMSNASV GPTSYNDSLN VFDHNYPAGN LEYSMEESTI TTVNYIPTSS 240 GSGPSLWPGP NTTSSLEMPS YWNWNEIDDV LTSSDHLDIS WPDDDYDKAE IKP* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M01177.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012848450.1 | 0.0 | PREDICTED: dof zinc finger protein DOF1.6-like | ||||
TrEMBL | A0A022QJ28 | 0.0 | A0A022QJ28_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M01177.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6171 | 20 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 1e-28 | TARGET OF MONOPTEROS 6 |
Link Out ? help Back to Top | |
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Phytozome | Migut.M01177.1.p |
Entrez Gene | 105968368 |