PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M01126.1.p | ||||||||
Common Name | MIMGU_mgv1a027100mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | Dof | ||||||||
Protein Properties | Length: 297aa MW: 31646.9 Da PI: 9.9358 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.2 | 4.3e-39 | 49 | 107 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + +kcprCds+ntkfCyynnyslsqPryfCkaCrryWt+GG+lrnvPvGgg+rk+k+ Migut.M01126.1.p 49 PQLQKCPRCDSANTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNVPVGGGCRKSKRP 107 6789****************************************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 1.3E-33 | 51 | 106 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.106 | 52 | 106 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 2.0E-25 | 53 | 106 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 54 | 90 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence Send to blast |
MDQERPDNNN INNNNQDKFQ QSVRRGKQPE VQMPAAHQHN NHQGPPPPPQ LQKCPRCDSA 60 NTKFCYYNNY SLSQPRYFCK ACRRYWTQGG TLRNVPVGGG CRKSKRPKPS PGETSRAQSS 120 SVAGIPSQNL AGGFIPGGGG GGQGFRAMPP VMPLSMGNSF YTGGSFLSSL AAMHSLPAGI 180 NQRATTLNLG GGGGGNNSQY DANNMAVFRA PPPLPPQQYF QAQNEFFPSA MTMPPRPLGS 240 WTQTFINRGG AASSSATNPS FWGGAATAGD NDNQAGGSSF NPTHWPDNHP GFDPSQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M01126.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012848592.1 | 0.0 | PREDICTED: dof zinc finger protein DOF3.2-like | ||||
TrEMBL | A0A022QL73 | 0.0 | A0A022QL73_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M01126.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 7e-35 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.M01126.1.p |