PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M01116.1.p | ||||||||
Common Name | LOC105969192, MIMGU_mgv1a016121mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 134aa MW: 14585.1 Da PI: 10.5257 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.3 | 1.2e-20 | 19 | 69 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrdp gk+ r++lg+f+tae+Aa+a+++a+++++g Migut.M01116.1.p 19 THFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEDAARAYDNAARRFRG 69 589*******.**********8...557************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.74E-31 | 19 | 77 | No hit | No description |
Pfam | PF00847 | 1.7E-13 | 19 | 69 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.44E-22 | 20 | 77 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 2.6E-39 | 20 | 83 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.538 | 20 | 77 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.1E-33 | 20 | 77 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.9E-11 | 21 | 32 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.9E-11 | 43 | 59 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0016020 | Cellular Component | membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence Send to blast |
MAPRPRAAAA AAETGQHETH FRGVRKRPWG RYAAEIRDPG KKSRVWLGTF DTAEDAARAY 60 DNAARRFRGS KAKTNFPPPD TDINKPNCFF TNIHSPSQSS TVESSSRETF PPSPPPAAVL 120 DSTSWTSLSA PDK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 6e-24 | 20 | 77 | 2 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
2gcc_A | 6e-24 | 20 | 77 | 5 | 63 | ATERF1 |
3gcc_A | 6e-24 | 20 | 77 | 5 | 63 | ATERF1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00542 | DAP | Transfer from AT5G44210 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M01116.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012849393.1 | 1e-92 | PREDICTED: ethylene-responsive transcription factor 4 | ||||
Swissprot | Q9FE67 | 4e-35 | ERF80_ARATH; Ethylene-responsive transcription factor 9 | ||||
TrEMBL | A0A022QJ91 | 3e-91 | A0A022QJ91_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-25 | erf domain protein 9 |
Link Out ? help Back to Top | |
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Phytozome | Migut.M01116.1.p |
Entrez Gene | 105969192 |
Publications ? help Back to Top | |||
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