PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M01086.1.p | ||||||||
Common Name | LOC105969033, MIMGU_mgv1a008138mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WOX | ||||||||
Protein Properties | Length: 384aa MW: 42382.2 Da PI: 7.4794 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 52.8 | 6.7e-17 | 59 | 119 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++ +eq+ +Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ Migut.M01086.1.p 59 KPRWNPRPEQIGILESIFNSgMVNPPRDEIRKIRAQLqefgQVGDANVFYWFQNRKSRSKH 119 89*****************99*************************************995 PP | |||||||
2 | Wus_type_Homeobox | 109.8 | 1.5e-35 | 58 | 121 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi iLe++++sG+++P+++ei++i+a+L+e+G+++d+NVfyWFQNrk+R+++k+ Migut.M01086.1.p 58 PKPRWNPRPEQIGILESIFNSGMVNPPRDEIRKIRAQLQEFGQVGDANVFYWFQNRKSRSKHKH 121 689**********************************************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.89E-12 | 54 | 126 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 10.171 | 55 | 120 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.7E-7 | 57 | 124 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.51E-7 | 58 | 121 | No hit | No description |
Pfam | PF00046 | 1.5E-14 | 59 | 119 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 6.6E-7 | 59 | 126 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008284 | Biological Process | positive regulation of cell proliferation | ||||
GO:0030010 | Biological Process | establishment of cell polarity | ||||
GO:0048825 | Biological Process | cotyledon development | ||||
GO:0090451 | Biological Process | cotyledon boundary formation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence Send to blast |
MASSNRHWPS MFKSKPCNTT THHQWQHQQH DVNSTLLSSP CTRTPFNTPG CEERTPEPKP 60 RWNPRPEQIG ILESIFNSGM VNPPRDEIRK IRAQLQEFGQ VGDANVFYWF QNRKSRSKHK 120 HRQNLHHTPK SRHPPPSAAA AAPPPSSSSS SSDKSSPNNS SEKSLSVGPI TVIDLLNSPT 180 ASVNQPFFHA NNANEFLAEP FFFPAVQQNA GATQSPPPSS ITQGFYFPDN IVADQNTVPS 240 NFLLSELMLM GHYPSSKKEE DDKLKFHQQN LSNYASTSAP PNPCLPPPFS VPSINQILQG 300 VGETVGPTRS TVFINDVCFE VGYGPFSVRE AFGDDAVLIH SSGHPVLTND WGVTLQPLQH 360 GGFYYLSRPF APPSPVDRTI DLI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M01086.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012849210.1 | 0.0 | PREDICTED: WUSCHEL-related homeobox 9 | ||||
TrEMBL | A0A022QLA8 | 0.0 | A0A022QLA8_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5942 | 23 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33880.1 | 2e-52 | homeobox-3 |
Link Out ? help Back to Top | |
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Phytozome | Migut.M01086.1.p |
Entrez Gene | 105969033 |