PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.M01037.1.p

Common Name

LOC105968871, MIMGU_mgv1a010659mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Trihelix

Protein Properties

Length: 307aa MW: 34339.7 Da PI: 5.5715

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.M01037.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.6	2.5e-16	24	114	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt++ + +L++a ++ +l+rg+l++++W+ev++++ + ++ +r+ +qCk++++ l+k+yk +k+ + +ss +p+f +le Migut.M01037.1.p 24 CWTQEATSTLVDAWGRRYLDLNRGNLRQKDWQEVADVVnahhgHTKKTRRTDVQCKNRIDTLKKKYKVEKAKITDSGGAASSPWPFFPRLE 114 8***********************************9999888999******************999998899999****997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	1.0E-24	22	114	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence Send to blast
MGDLTESSTP QAPASRQVPF REDCWTQEAT STLVDAWGRR YLDLNRGNLR QKDWQEVADV 60 VNAHHGHTKK TRRTDVQCKN RIDTLKKKYK VEKAKITDSG GAASSPWPFF PRLEYLIGSN 120 LNKTQGKVSP SPMPLASYTP PLCLPAPPLA VPLPYRNTRT PAVFSPPILP QKRPMPSPAV 180 EESYFRKNYS AMAAAAAAAA AEDEAEEDDG ELDGDEAEGS EDRAAEEEEV GETGMRRLAK 240 AIESFGEIFE KVESMKQRQM IELEKQRMQF AKDLEVQRMQ LFMDTQIQLQ KIKQAKRSGS 300 SDDIYS*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.M01037.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012849011.1	0.0	PREDICTED: trihelix transcription factor ASIL2-like
TrEMBL	A0A022QNP0	0.0	A0A022QNP0_ERYGU; Uncharacterized protein
STRING	Migut.M01037.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1318	23	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	2e-59	sequence-specific DNA binding transcription factors

Link Out ? help Back to Top
Phytozome	Migut.M01037.1.p
Entrez Gene	105968871