PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M00859.1.p | ||||||||
Common Name | MIMGU_mgv1a017888mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 343aa MW: 38185.1 Da PI: 6.6056 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.7 | 2.9e-18 | 126 | 176 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f ++eeAa a+++ + +l+ge Migut.M00859.1.p 126 LYRGVRQRH-WGKWVAEIRLPRK---RTRLWLGTFESPEEAAMAYDRQAFRLRGE 176 59******9.**********954...5**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.41E-33 | 125 | 184 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 4.4E-31 | 126 | 184 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.748 | 126 | 183 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.48E-22 | 126 | 185 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.6E-37 | 126 | 189 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 8.7E-13 | 127 | 176 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.0E-10 | 127 | 138 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.0E-10 | 149 | 165 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence Send to blast |
MEVGNLSSNT IQNQCDDSDA NNKPKPPREK RAAGLSTYTP PPPKKIRGSS TLAFPFALDD 60 DYCQPSTTAA VGLSFLERTR LNPKMISFSH HLHLQPLDYN SQSRDATNNG GGETTPPLPP 120 STPPKLYRGV RQRHWGKWVA EIRLPRKRTR LWLGTFESPE EAAMAYDRQA FRLRGESARL 180 NFPHRFRSNH YKPSDQIQPS PPPLISPSNN SSLISPATTK TTTNNHWFFL EEEPIRRDDR 240 DASPFTTSII NGANAVNYGE PSSSNNNHAK DIETGYHPII DPTYLSTDNY LSSGNDDFGY 300 QWLADLLDGL SDPIGISCST DEVFTADSLQ DNFRLDSNSS KS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-20 | 125 | 188 | 4 | 68 | ATERF1 |
3gcc_A | 1e-20 | 125 | 188 | 4 | 68 | ATERF1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M00859.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A022RWH9 | 0.0 | A0A022RWH9_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22190.1 | 4e-33 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.M00859.1.p |