PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M00715.1.p | ||||||||
Common Name | LOC105966768, MIMGU_mgv1a010055mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | BES1 | ||||||||
Protein Properties | Length: 325aa MW: 35157.2 Da PI: 8.9563 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 209.6 | 8e-65 | 4 | 155 | 1 | 150 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspess 93 gg+ r+p+wkErEnnkrRERrRRaiaaki+aGLR +Gnyklpk++DnneVlkALc eAGw+ve+DGttyrkg++p e+++++ +s + s+++s Migut.M00715.1.p 4 GGAARMPSWKERENNKRRERRRRAIAAKIFAGLRLYGNYKLPKHCDNNEVLKALCDEAGWTVEHDGTTYRKGCRPVENMDTMETSYNPSTHTS 96 6899***************************************************************************************** PP DUF822 94 lqsslkssalaspvesysaspksssfpspssl..dsislasaasllpvlsvlslvsssl 150 ++ s+++s+ +sp +sy++sp+sssfpsp+s+ +a+ +sl+p+l++ls++sss+ Migut.M00715.1.p 97 YNPSPHTSYNPSPHTSYNPSPASSSFPSPVSSiyAPSIIADGNSLIPWLRNLSSSSSSA 155 *****************************9861144456777**********9977765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 8.5E-63 | 6 | 149 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
MTGGGAARMP SWKERENNKR RERRRRAIAA KIFAGLRLYG NYKLPKHCDN NEVLKALCDE 60 AGWTVEHDGT TYRKGCRPVE NMDTMETSYN PSTHTSYNPS PHTSYNPSPH TSYNPSPASS 120 SFPSPVSSIY APSIIADGNS LIPWLRNLSS SSSSATSSSK FVHHHYMHNS GTVSAPVTPP 180 LSSSPTARDL LINADRANSF ARPFLPLSTP PSPARHTTLP ARPYPYPIQS GPTSPTFSLV 240 SSNPFGFRVE DLSRSGSLMC TPGQSGTCSP VIGASDIPMA EVIPNEFAFG SNTKGLVKAW 300 EGERIHEVCG SDELELTLGT SKTR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-23 | 8 | 79 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-23 | 8 | 79 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-23 | 8 | 79 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-23 | 8 | 79 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M00715.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP721490 | 9e-62 | KP721490.1 Eucalyptus grandis brassinazole-resistant 1 protein (BES3) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012846804.1 | 0.0 | PREDICTED: BES1/BZR1 homolog protein 4 | ||||
Swissprot | Q9ZV88 | 9e-95 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | A0A022QLF5 | 0.0 | A0A022QLF5_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M00715.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1984 | 24 | 64 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 2e-88 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Phytozome | Migut.M00715.1.p |
Entrez Gene | 105966768 |