PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Migut.M00569.2.p | ||||||||
Common Name | LOC105965898, MIMGU_mgv1a010586mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 302aa MW: 33285.4 Da PI: 8.5889 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 58.3 | 1.5e-18 | 43 | 88 | 6 | 51 |
RWP-RK 6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 s++++s+ Fslp+ AA +Lgvc+TvLK+ C +G+ RWP+Rki s Migut.M00569.2.p 43 SFDEVSNLFSLPLSYAADSLGVCPTVLKKLCYDNGLVRWPYRKILS 88 799****************************************965 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 14.049 | 21 | 110 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.9E-16 | 44 | 87 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 302 aa Download sequence Send to blast |
MSTAPQNPTQ NNQSPIPISS PASIIPNRNP TPNPPSHALK SPSFDEVSNL FSLPLSYAAD 60 SLGVCPTVLK KLCYDNGLVR WPYRKILSGK SIEEIKKDAA IEKEKNLAEL KVYGERNNSL 120 ARGPQPQSTN TISPQESSTV RILPQQPNKD NQIQSSQIMK IGNSTISDEF KYGFPSDGLS 180 SVSYRWWGNK SGGENVVDTL QRVDENADER KEQHEGKVDH AANLSSMDDE VMTQGKKNDE 240 PVGLLSVLRK KAAKDGLQAL KLGVYRGYSD GKNLDRTKKM MLVQIFKSSL PSEWGDMYSE 300 S* |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Migut.M00569.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012845899.1 | 0.0 | PREDICTED: protein NLP1 isoform X2 | ||||
TrEMBL | A0A022QQR3 | 0.0 | A0A022QQR3_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M00569.1.p | 0.0 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G59580.2 | 4e-09 | Nin-like family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Migut.M00569.2.p |
Entrez Gene | 105965898 |