PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00105.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 445aa    MW: 49378.7 Da    PI: 6.4521
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00105.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.32.1e-16263309455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn  ErrRRdriN+++  L+el+P++      K +Ka++L +A+eY+ksLq
  Migut.M00105.1.p 263 VHNLSERRRRDRINEKMKALQELIPHS-----NKSDKASMLDEAIEYMKSLQ 309
                       5*************************7.....59*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.36E-17253313No hitNo description
SuperFamilySSF474597.33E-20256325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.574259308IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-14263309IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.6E-20263317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-17265314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MESCLIPDWN TEVGVEFPTS IQRKSLGIDS DLMELLWQNG ELVLHSQTNH RKIINDDPSY  60
KSKQSHNTNN RVSTSGATEI SNTFIQDDET SSWIDCPIDE SFEKEFCANF LSDGIPLQCE  120
NVLFSPPPRF ESFNNSNSNN NSNCNNQEMH VQKRRAENGG VPECSGRTFG SSHCASNQVV  180
DKVKSSESME RETIGQAIAS CSGGSGNSSF WKTSSPCSND TTNGHKRKSR DVEESECRSD  240
ATELESGSGN KSRTNRRTRV AEVHNLSERR RRDRINEKMK ALQELIPHSN KSDKASMLDE  300
AIEYMKSLQL QLQLMWMGSG MGQMMLPGLQ QYMSRAGMGV GPQMYPAHVA VQNLVRLSRS  360
PLVHQAMNIA SNQNQGPMGP SHVVGPVNYP NHMQNSGFHE QYANYMGFHS TPNASQPMNM  420
FNFGFHSAQQ NQVSAPPANG NEAI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1267272ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M00105.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830904.10.0PREDICTED: transcription factor PIF4
TrEMBLA0A022RS810.0A0A022RS81_ERYGU; Uncharacterized protein
STRINGMigut.M00105.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA104652226
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.34e-50phytochrome interacting factor 3-like 5