PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00064.2.p
Common NameLOC105951929, MIMGU_mgv1a007482mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CO-like
Protein Properties Length: 407aa    MW: 44412.2 Da    PI: 5.0825
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00064.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.32.7e-07544639
          zf-B_box  6 CpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                      C+ ++e++ + +C+++   lC +C  ++H+       H++
  Migut.M00064.2.p  5 CEFCGEQRSIVYCQSDAASLCLSCDRNIHSAnalskrHSR 44
                      *****************************65677777765 PP
2zf-B_box20.59.7e-074689440
          zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40
                       +C++++++++   C + ++ lC++C   eH +       H+++
  Migut.M00064.2.p 46 LVCERCNSQPAFVRCVEEKVSLCRNCDWMEHGNgsnvntaHKRQ 89
                      68*****************************5578888888865 PP
3CCT61.42.9e-21349392144
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                       R  a++RY+eK+k RkFeKk+rYesRKa+A+ R RvKGrFvk+ 
  Migut.M00064.2.p 349 RTDAVMRYREKKKARKFEKKVRYESRKARADVRRRVKGRFVKAG 392
                       889**************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.343147IPR000315B-box-type zinc finger
CDDcd000218.69E-7447No hitNo description
SMARTSM003363.9E-8447IPR000315B-box-type zinc finger
PROSITE profilePS501199.1724391IPR000315B-box-type zinc finger
CDDcd000215.04E-44776No hitNo description
SMARTSM003361.14891IPR000315B-box-type zinc finger
PROSITE profilePS5101715.378349391IPR010402CCT domain
PfamPF062034.1E-16349391IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0048579Biological Processnegative regulation of long-day photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MGYLCEFCGE QRSIVYCQSD AASLCLSCDR NIHSANALSK RHSRTLVCER CNSQPAFVRC  60
VEEKVSLCRN CDWMEHGNGS NVNTAHKRQA VNCYTGCPSA SELSANWSFL LDSTCEQGIN  120
LLSITDKTPP ITCENSAGKN NNSQVLGESN NVDADKSTEW MDSLTPLLDH RLNVDHRSGS  180
TSSSAPKVFL SGAKGPAVCE DGGLYDDLCM DEVDLNIENY EELFGVAYDN PELFGYDGID  240
EIFGTKDMSG SNCHGAYAAE GSSIGGANVM QSACSNAESA DSFASCKTEP NLRYSRQLHQ  300
TLSFSGINGE IEINGGDFQD CGVSSSMAIA GEPPWYPPGP DSSLPSTSRT DAVMRYREKK  360
KARKFEKKVR YESRKARADV RRRVKGRFVK AGDAYDYDPL SPSRSF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M00064.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830864.10.0PREDICTED: zinc finger protein CONSTANS-LIKE 9
SwissprotQ9SSE51e-130COL9_ARATH; Zinc finger protein CONSTANS-LIKE 9
TrEMBLA0A022RV220.0A0A022RV22_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07650.41e-100CONSTANS-like 9