PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01952.1.p
Common NameLOC105970145, MIMGU_mgv1a001935mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 737aa    MW: 83811.5 Da    PI: 6.5221
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01952.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS381.21.2e-1163637341374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d ++a++lL+++++++sp gd +qRla+yf+ +L+arla+++s++ ka+ +++t+    ++ l+a+ ++   sP+ k+
  Migut.L01952.1.p 363 LRTLLISCAQAVAADDCRNANELLKQIRQHSSPFGDGNQRLAHYFADGLEARLAGTGSQIHKAFVSKRTT---AADYLKAYYTYIASSPFRKI 452
                       6789************************************************************999999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s +++N+ Il    +++r+H+iDf+i +G+QWp+L+q +a+R++gpp+lRiTg++ p++g   +e++eetg+rL ++A++++vpfe+n+ +a+
  Migut.L01952.1.p 453 SAFATNKSILMKSGKATRLHVIDFGILYGFQWPTLIQRIADREGGPPKLRITGIDFPQPGfrPAEKIEETGRRLDHYAKTFNVPFEYNA-IAQ 544
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e++++e+L++++gE ++V + ++ ++llde+v  es r++vL+l+++++P+++++   +  ++++ F++rf e l ++salfd+lea++pr
  Migut.L01952.1.p 545 KWETIKIEDLKIEEGEFVVVICLYRTKNLLDETVVAESSRTTVLNLIRRINPNLFIHGIVNGAYSAPFFVTRFREVLFHFSALFDMLEANIPR 637
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       e+ er+ +Er ++g+e+ nv+aceg er+er et+++W+ r  +aGF++vp++ ++++ a   +r+++ + + ++e+s++l++gWk+r ++++
  Migut.L01952.1.p 638 EKAERMLIERDIFGKEALNVIACEGWERVERPETYKQWQVRNLRAGFGQVPFEREIMERAIDKVRTFYHKDFVIDEDSQWLLMGWKGRIIYAI 730
                       ********************************************************************888********************** PP

              GRAS 371 SaWr 374
                       S+W+
  Migut.L01952.1.p 731 SCWE 734
                       ***5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098566.88337714IPR005202Transcription factor GRAS
PfamPF035144.2E-114363734IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    Send to blast
MDPRFHGPLN SSSNGFQLEN QPVPDFSNRK LVNAPRFEII YPDKKPVNRQ HRNQSAPLQQ  60
HHIEGLHLIP NQPFPNVPIP TSFIDVEDGY QDDCDFSDEV LRFIDQMLME EDMEDKTHML  120
QESLDFQAKE KSFYEVLGKK YPPSPKPDSS SLVNPYGEVG DDGYSYCNRY NSSTSSSNGS  180
GYLIDVVDPS WINSRVDYDA SLVNSSNSLH NIVNGFSDSP VSPLQDGDAY SESQLVWNFR  240
KGVDEASKFL ASGSKFMVNV GLNQEQQIHS ESRGKKNYHL ADRDLEEERI TKMPAVAAES  300
SIPIEEFDEA LLHSMGEGEK KFAVYRTNLR NEANKITQKN GQGSGGAKGR GKKNSRKKEV  360
IDLRTLLISC AQAVAADDCR NANELLKQIR QHSSPFGDGN QRLAHYFADG LEARLAGTGS  420
QIHKAFVSKR TTAADYLKAY YTYIASSPFR KISAFATNKS ILMKSGKATR LHVIDFGILY  480
GFQWPTLIQR IADREGGPPK LRITGIDFPQ PGFRPAEKIE ETGRRLDHYA KTFNVPFEYN  540
AIAQKWETIK IEDLKIEEGE FVVVICLYRT KNLLDETVVA ESSRTTVLNL IRRINPNLFI  600
HGIVNGAYSA PFFVTRFREV LFHFSALFDM LEANIPREKA ERMLIERDIF GKEALNVIAC  660
EGWERVERPE TYKQWQVRNL RAGFGQVPFE REIMERAIDK VRTFYHKDFV IDEDSQWLLM  720
GWKGRIIYAI SCWEPV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3h_A2e-503467351379Protein SCARECROW
5b3h_D2e-503467351379Protein SCARECROW
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01952.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012850398.10.0PREDICTED: scarecrow-like protein 9
SwissprotO809330.0SCL9_ARATH; Scarecrow-like protein 9
TrEMBLA0A022QH710.0A0A022QH71_ERYGU; Uncharacterized protein
STRINGMigut.L01952.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27624191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein