PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01877.1.p
Common NameLOC105956576, MIMGU_mgv1a026595mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 389aa    MW: 43686.5 Da    PI: 5.6491
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01877.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS265.91.3e-81238025373
              GRAS  25 arlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPilkfshltaNqaIleavegeervHi 114
                       + l++ as++gdp+qRl++yf++AL ++ +r ++++      ++++    +++l++++    ++++ P+++f++ + N+aIlea+ g  +vHi
  Migut.L01877.1.p   2 WVLNNVASSAGDPNQRLTSYFLKALVSKASRLCPTTT----FNSAAAVGGARRLMSVTElagYVDLIPWHRFGFCASNSAILEAIRGFPKVHI 90 
                       7899**************************9544443....222222234444444333377******************************* PP

              GRAS 115 iDfdisqGlQWpaLlqaLasRp....egpp..slRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.........vakrledl 189
                       +Df+i++++QWp+L++a a+R+    +gpp  slRi +++   ++    + ++ee+g+rL++fA+  +vpf+f+v+             l +l
  Migut.L01877.1.p  91 LDFSITHCMQWPTLIDAVAKRAaedgGGPPllSLRISVLSWRPNVppfLNASIEEVGQRLTNFANYRDVPFQFDVVhhhevtgqdSNLLLGQL 183
                       **********************99887788899*******9777788999**************************76665443222245667 PP

              GRAS 190 eleeLrvkpgEalaVnlvlqlhrll............desvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalf 268
                       ++++L+++++Eal+Vn++  l +l+            ++s +++  rd++L+++++l+P +v++v++++d+  ++ s++ r++ +++y+   f
  Migut.L01877.1.p 184 NPSTLKLRNDEALVVNCQNWLRYLPddedddheeddiRRSIPSSYGRDSFLETIRNLNPCLVTIVDEDCDLggSNRSLASRITTCFNYMLIPF 276
                       9************************999999988866556666669*************************645569**************** PP

              GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlek.WrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
                       d+le+ lp++s  r  +E+  +gr+i+nvv  ega+r+er+e+ ++ Wr++ ++ GF++vp++e+++k+++ ll++++  g+ ++++++ ++l
  Migut.L01877.1.p 277 DALETFLPKNSARRLDYEED-IGRKIENVVGFEGARRIERQESSGNlWRRMAMKNGFTSVPFGEDTVKEVRVLLSEHA-SGWGMKKDEEMMIL 367
                       ********************.*********************98755*******************************.8899********** PP

              GRAS 361 gWkdrpLvsvSaW 373
                       +Wk+++ v ++aW
  Migut.L01877.1.p 368 TWKGHNYVYATAW 380
                       ************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098542.2111362IPR005202Transcription factor GRAS
PfamPF035144.5E-792380IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MWVLNNVASS AGDPNQRLTS YFLKALVSKA SRLCPTTTFN SAAAVGGARR LMSVTELAGY  60
VDLIPWHRFG FCASNSAILE AIRGFPKVHI LDFSITHCMQ WPTLIDAVAK RAAEDGGGPP  120
LLSLRISVLS WRPNVPPFLN ASIEEVGQRL TNFANYRDVP FQFDVVHHHE VTGQDSNLLL  180
GQLNPSTLKL RNDEALVVNC QNWLRYLPDD EDDDHEEDDI RRSIPSSYGR DSFLETIRNL  240
NPCLVTIVDE DCDLGGSNRS LASRITTCFN YMLIPFDALE TFLPKNSARR LDYEEDIGRK  300
IENVVGFEGA RRIERQESSG NLWRRMAMKN GFTSVPFGED TVKEVRVLLS EHASGWGMKK  360
DEEMMILTWK GHNYVYATAW APLDRAIT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_B1e-501382110474Protein SHORT-ROOT
5b3h_B4e-51138256420Protein SHORT-ROOT
5b3h_E4e-51138256420Protein SHORT-ROOT
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01877.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835882.10.0PREDICTED: scarecrow-like protein 32
TrEMBLA0A022RFD50.0A0A022RFD5_ERYGU; Uncharacterized protein
STRINGMigut.L01877.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA103032227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-102GRAS family protein