PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01782.2.p
Common NameLOC105956769, MIMGU_mgv1a008175mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family G2-like
Protein Properties Length: 383aa    MW: 42871.9 Da    PI: 7.7739
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01782.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.18.4e-334498155
           G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                      kprl+Wt +LHerF+eav+qLGG+ekAtPk++l+lm+++gLtl+h+kSHLQkYRl
  Migut.L01782.2.p 44 KPRLKWTADLHERFIEAVNQLGGAEKATPKSVLKLMGIPGLTLYHLKSHLQKYRL 98
                      79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.94641101IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.2E-304299IPR009057Homeodomain-like
SuperFamilySSF466891.54E-1643100IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-234499IPR006447Myb domain, plants
PfamPF002496.4E-104697IPR001005SANT/Myb domain
PfamPF143791.6E-22139185IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MYHRQGKNIH PSSKMSIQPH ERPLFLQGAN GNGDSGLMLS TDAKPRLKWT ADLHERFIEA  60
VNQLGGAEKA TPKSVLKLMG IPGLTLYHLK SHLQKYRLSK THYGQATSGN NNKASTADRV  120
PEPHTSNPNI ATQTTKNIHL GEAIQMQINV QQRLHEQLEV QRHLQLRIEA QGKYLESVLE  180
KAQETIGSQN LGAFSGMKEL SDTSLQQRQK AQAADCSMDS CLNSFEGSVM DQELHNNLGL  240
KPFNFRASME SKVNDKDTSL QKTELMWREN LKESGKYLSR ANNNVENAET NLNSLSMNID  300
LLGDQWNGDS NYREGTFKEA KADAKFFDHN TNRSDLSRPE KQKASTELKL PFVSTNLDLN  360
TNDENNIASN CTKLDLNGFS WS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-2144100157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-2144100157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-2144100157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-2144100157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-2143100158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01782.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836120.10.0PREDICTED: uncharacterized protein LOC105956769 isoform X1
RefseqXP_012836121.10.0PREDICTED: uncharacterized protein LOC105956769 isoform X1
SwissprotQ9SQQ99e-99PHL9_ARATH; Myb-related protein 2
TrEMBLA0A022RFT60.0A0A022RFT6_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.31e-93G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Nakano Y,Naito Y,Nakano T,Ohtsuki N,Suzuki K
    NSR1/MYR2 is a negative regulator of ASN1 expression and its possible involvement in regulation of nitrogen reutilization in Arabidopsis.
    Plant Sci., 2017. 263: p. 219-225
    [PMID:28818378]