PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.L01761.1.p | ||||||||
Common Name | LOC105956507, MIMGU_mgv1a021879mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 204aa MW: 21909 Da PI: 4.8609 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.6e-19 | 21 | 71 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++k++g+Wv+eIr+p r r++lg+f t+e+Aa a++ a+++l+g Migut.L01761.1.p 21 IYRGVRRRKSSGKWVSEIREP-----RtpNRVWLGTFPTPEMAAVAYDVAALALKG 71 69******************9.....4478***********************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.2E-12 | 20 | 71 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.92E-30 | 20 | 81 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 4.9E-29 | 21 | 81 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.16E-20 | 21 | 81 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 22.655 | 21 | 79 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.0E-34 | 21 | 85 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-8 | 22 | 33 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-8 | 61 | 81 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
MSSSQSTGGS GGGRVSGRHP IYRGVRRRKS SGKWVSEIRE PRTPNRVWLG TFPTPEMAAV 60 AYDVAALALK GTEAKLNFPN SASSHPVPAS TSPQDIQAAA AGAAAAAGAA GDAIFGRNNN 120 IPETDEVAAA ARSHEEIFPG WNIDHDEEFV DEDLIFDMPN VLVNMAQGMM ISPPRLGPSD 180 HNYYGDNHVD YYDNDDHNLW NYP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-13 | 10 | 80 | 3 | 73 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.L01761.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012835813.1 | 1e-149 | PREDICTED: ethylene-responsive transcription factor ERF024 | ||||
Swissprot | Q9SJR0 | 3e-58 | ERF24_ARATH; Ethylene-responsive transcription factor ERF024 | ||||
TrEMBL | A0A022RE14 | 1e-147 | A0A022RE14_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA553 | 22 | 110 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 8e-46 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.L01761.1.p |
Entrez Gene | 105956507 |