PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.L01740.1.p | ||||||||
Common Name | MIMGU_mgv1a023816mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 251aa MW: 29180.8 Da PI: 5.1996 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.9 | 4.1e-19 | 88 | 140 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++++eqle Le+ F+++ ++ e++ +L+k+lgL+ rq+ vWFqNrRa++k Migut.L01740.1.p 88 KKRLSNEQLELLENSFQEDIKLEPEKKMKLSKELGLQPRQIAVWFQNRRARWK 140 5569************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 119.3 | 2.1e-38 | 87 | 178 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kk+rls+eq++lLE+sF+e+ kLepe+K++l++eLglqprq+avWFqnrRAR+k+kqlE+ y+aL+++yda+++++++L++ev +Lr+ lke Migut.L01740.1.p 87 KKKRLSNEQLELLENSFQEDIKLEPEKKMKLSKELGLQPRQIAVWFQNRRARWKAKQLERLYDALQQEYDAVSRDKQKLQQEVMALRAILKE 178 9**************************************************************************************88875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 16.908 | 82 | 142 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 9.84E-19 | 84 | 152 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 5.4E-17 | 85 | 146 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.02E-16 | 87 | 143 | No hit | No description |
Pfam | PF00046 | 2.5E-16 | 88 | 140 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 7.1E-20 | 89 | 149 | IPR009057 | Homeodomain-like |
PRINTS | PR00031 | 5.4E-5 | 113 | 122 | IPR000047 | Helix-turn-helix motif |
PROSITE pattern | PS00027 | 0 | 117 | 140 | IPR017970 | Homeobox, conserved site |
PRINTS | PR00031 | 5.4E-5 | 122 | 138 | IPR000047 | Helix-turn-helix motif |
Pfam | PF02183 | 8.0E-8 | 142 | 176 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MDWNGNYVCR VPFVSRPAVD NSLSFLYNYN YDQHFPPEMK QQAAITDHEQ ALMMQPNLTM 60 EKNNNNNHNN ISMMNNYNTG LDINDPKKKR LSNEQLELLE NSFQEDIKLE PEKKMKLSKE 120 LGLQPRQIAV WFQNRRARWK AKQLERLYDA LQQEYDAVSR DKQKLQQEVM ALRAILKENQ 180 VGKNKEVSIE ISGEETVEST SLIPIINNSN ELHDQIAECS YPLKVDDYYN NNNTTVIMPP 240 PPYWPASSPN * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 134 | 142 | RRARWKAKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.L01740.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836076.1 | 0.0 | PREDICTED: putative homeobox-leucine zipper protein ATHB-51 isoform X1 | ||||
TrEMBL | A0A022RDZ9 | 1e-170 | A0A022RDZ9_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3869 | 22 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 9e-37 | homeobox 51 |
Link Out ? help Back to Top | |
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Phytozome | Migut.L01740.1.p |