PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01507.2.p
Common NameLOC105967974, MIMGU_mgv1a008889mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HSF
Protein Properties Length: 360aa    MW: 41067.3 Da    PI: 5.7783
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01507.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.56e-35611532103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Flkk++e+++d++++ +isws++  sfvv+d+++f++++Lpk+Fkh+nf+SFvRQLn+YgF+k++ ++         weF+++ F++gkk+ll
  Migut.L01507.2.p  61 FLKKTFEMVDDHHTDAVISWSSTRLSFVVWDPHKFSTDLLPKHFKHNNFSSFVRQLNTYGFRKIDADR---------WEFANEGFQQGKKHLL 144
                       9****************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                       ++ikr+k++
  Migut.L01507.2.p 145 KNIKRRKHN 153
                       ******975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467853.26E-3356150IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.101.6E-3757150IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004153.4E-5757150IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.5E-186184IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004476.3E-3161150IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.5E-1899111IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS004340100124IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.5E-18112124IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MECSVNAEIG LKMVGSDGGV FVKEEPLIIL DGDENLGSGF DGGAAAVPME GLRENNAPPP  60
FLKKTFEMVD DHHTDAVISW SSTRLSFVVW DPHKFSTDLL PKHFKHNNFS SFVRQLNTYG  120
FRKIDADRWE FANEGFQQGK KHLLKNIKRR KHNHQSCHLE YSTKHGFEAE LEKLRTEQRT  180
LRTEVAKLRQ QQETTMDHLA AVKERLRMHE TRQNHMAVFV VNSLRDPAFF QCFVDKLKKR  240
ERVSGGGGIL KKRRLEVDST RTVDSGEIVD VSVVDDDDEC KRLRVSSDES GGSRLMEMKV  300
DTASETNSVS SENFVLWEKL MEDDMIYEDD QETKEQYDIV SELEDLISKP MRNIVGPLG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B2e-23361503129Heat shock factor protein 1
5d5v_B2e-23361503129Heat shock factor protein 1
5d5v_D2e-23361503129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143149LKNIKRR
2234239DKLKKR
3237253KKRERVSGGGGILKKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01507.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848013.10.0PREDICTED: heat stress transcription factor A-7b-like
TrEMBLA0A022QI690.0A0A022QI69_ERYGU; Uncharacterized protein
STRINGMigut.L01507.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-72heat shock transcription factor A2