PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01319.1.p
Common NameLOC105967482, MIMGU_mgv1a021435mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 266aa    MW: 30502 Da    PI: 6.2605
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01319.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.26.7e-1967120356
                       --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       k+++++ eq+++Le+ Fe+++++  e++ +LA+ lgL+ rq+ +WFqNrRa++k
  Migut.L01319.1.p  67 KKRRLNIEQVRTLEKSFESCNKLEPERKIQLARALGLQPRQIAIWFQNRRARWK 120
                       4557899**********************************************9 PP
2HD-ZIP_I/II127.17.5e-4166158193
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                       ekkrrl+ eqv++LE+sFe+ +kLeperK +lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr++da+k en++L + +++L++e+k+
  Migut.L01319.1.p  66 EKKRRLNIEQVRTLEKSFESCNKLEPERKIQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAVKLENDALLTLNQKLHAEIKA 158
                       69***************************************************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.13E-1958124IPR009057Homeodomain-like
PROSITE profilePS5007116.92562122IPR001356Homeobox domain
SMARTSM003891.3E-1965126IPR001356Homeobox domain
CDDcd000865.25E-1767123No hitNo description
PfamPF000463.0E-1667120IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.4E-1969129IPR009057Homeodomain-like
PRINTSPR000311.5E-593102IPR000047Helix-turn-helix motif
PROSITE patternPS00027097120IPR017970Homeobox, conserved site
PRINTSPR000311.5E-5102118IPR000047Helix-turn-helix motif
PfamPF021835.5E-13122162IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009744Biological Processresponse to sucrose
GO:0048826Biological Processcotyledon morphogenesis
GO:0080022Biological Processprimary root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MGFFHSNFML QINPQQEDDH HTTQFHGVAS SLLGKRPLDE DYTNNNNIIN HCGDDELSDD  60
GSNIGEKKRR LNIEQVRTLE KSFESCNKLE PERKIQLARA LGLQPRQIAI WFQNRRARWK  120
TKQLEKDYDL LKRQFDAVKL ENDALLTLNQ KLHAEIKALK KREPTESINL NKETEGSSSN  180
NRSENSSEMK NIALSDINYY SSRNDASIDG PLTAAIIRPL FPSRVTDNIQ TAVKEESRSS  240
SLCNLFCSMD DQTGFWPWLD QPNFN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114122RRARWKTKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00225DAPTransfer from AT1G69780Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01319.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847536.10.0PREDICTED: homeobox-leucine zipper protein ATHB-13
SwissprotQ8LC039e-90ATB13_ARATH; Homeobox-leucine zipper protein ATHB-13
TrEMBLA0A022QL880.0A0A022QL88_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8482498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.16e-85HD-ZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ribone PA,Capella M,Chan RL
    Functional characterization of the homeodomain leucine zipper I transcription factor AtHB13 reveals a crucial role in Arabidopsis development.
    J. Exp. Bot., 2015. 66(19): p. 5929-43
    [PMID:26136262]
  3. Wang X, et al.
    Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.
    Sci China Life Sci, 2018. 61(1): p. 79-87
    [PMID:28887625]
  4. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]