PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01279.1.p
Common NameLOC105967706, MIMGU_mgv1a009784mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family G2-like
Protein Properties Length: 333aa    MW: 37239.9 Da    PI: 7.9829
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01279.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.81.6e-302074155
           G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                      kprl+Wt eLH+ F++ v++LGG+ekAtPk+++++m+++gLtl+h+kSHLQkYRl
  Migut.L01279.1.p 20 KPRLKWTRELHQIFIDSVNHLGGAEKATPKSLMRIMGIDGLTLYHLKSHLQKYRL 74
                      79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.0671777IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.3E-281877IPR009057Homeodomain-like
SuperFamilySSF466891.08E-141975IPR009057Homeodomain-like
TIGRFAMsTIGR015579.3E-222075IPR006447Myb domain, plants
PfamPF002498.1E-62273IPR001005SANT/Myb domain
PfamPF143798.9E-22113159IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MALKNAHGKE TTLVLSSDAK PRLKWTRELH QIFIDSVNHL GGAEKATPKS LMRIMGIDGL  60
TLYHLKSHLQ KYRLGKSQLP HTCHQNKPED IEENQLTDKT CDGAHEQIKE SLQVAHSLQM  120
QMEVQKKLHE QIEVQRHLQL RIEAQGKYLQ SVLRKAQETI SEYSSCSIEV EHAKAQLSQL  180
ASMVDSTCPS SSFSVLTESG GSLLKNEGNK PLGHNGYSLE SSLTSSDSSA MKEETQTTQQ  240
LAKNYTTINK GKRNSAMLSL MEMNPAKNSE SENQARNVKR SKSTTTDEIN HREKFDCDKQ  300
VQRFNLNDFD SGPKVIDLNR NGLDLFGASF SI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01279.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847779.10.0PREDICTED: putative Myb family transcription factor At1g14600
SwissprotF4I2744e-69PHL8_ARATH; Myb family transcription factor PHL8
TrEMBLA0A022QMD60.0A0A022QMD6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60361932
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.13e-71G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]