PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01277.1.p
Common NameMIMGU_mgv1a021632mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 271aa    MW: 29885.4 Da    PI: 9.967
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01277.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding513.2e-162673147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqky 47
                      rg W + Ed +l+++v ++G+++W++Ia++++ +gR++k+c++rw++ 
  Migut.L01277.1.p 26 RGHWRAAEDAKLKELVSLYGPHNWNLIAHKLQyNGRSGKSCRLRWYNQ 73
                      899*******************************************96 PP
2Myb_DNA-binding50.84e-1682124347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       ++++eE+e+l  a+ ++G++ W+  ar ++ gRt++ +k++w+ +
  Migut.L01277.1.p  82 AFSEEEEERLMSAHSLYGNK-WAMLARLFP-GRTDNAVKNHWHVL 124
                       79******************.*********.***********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.5322174IPR017930Myb domain
SMARTSM007172.7E-142576IPR001005SANT/Myb domain
SuperFamilySSF466893.63E-2726121IPR009057Homeodomain-like
PfamPF002493.7E-152674IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.6E-232781IPR009057Homeodomain-like
CDDcd001673.63E-132972No hitNo description
PROSITE profilePS5129423.82675129IPR017930Myb domain
SMARTSM007176.5E-1279127IPR001005SANT/Myb domain
CDDcd001672.00E-1082125No hitNo description
PfamPF002496.2E-1382124IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.2E-1982128IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MLIYNNNNNN NAKRNGQSSS SKVCSRGHWR AAEDAKLKEL VSLYGPHNWN LIAHKLQYNG  60
RSGKSCRLRW YNQLDPRINT RAFSEEEEER LMSAHSLYGN KWAMLARLFP GRTDNAVKNH  120
WHVLMARNYR RHHSSSTSSL LTNTNTIITA AAAVEPSETP PPFPNSGGGA PNNTPLWAPQ  180
TYLGLFPGPS TSEMMSVFKH GNSYNYISAT SAIIHQQAPP PPPPCINNKN NNTSPSRQQV  240
STADIVAGTA EERTAPPFID FLGVGGTLFN *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-29261287107B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01277.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075638.12e-86myb-like protein Q
TrEMBLA0A022QLD40.0A0A022QLD4_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16842470
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.13e-63myb domain protein 117