PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01264.2.p
Common NameLOC105967544, MIMGU_mgv1a023765mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 360aa    MW: 40226.3 Da    PI: 7.6239
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01264.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.91.7e-161158148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT +Ed++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl
  Migut.L01264.2.p 11 KGPWTRDEDQKLLAYIQEHGHGSWRSLPAKAGLERCGKSCRLRWTNYL 58
                      79********************************************97 PP
2Myb_DNA-binding48.12.7e-1564107146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ +t E++ +++++++lG++ W++Ia++++ +Rt++++k++w++
  Migut.L01264.2.p  64 RGKLSTHEEKTIIRLHALLGNR-WSAIAAHLP-KRTDNEIKNYWNT 107
                       7899******************.*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129423.534662IPR017930Myb domain
Gene3DG3DSA:1.10.10.609.4E-23661IPR009057Homeodomain-like
SuperFamilySSF466892.25E-289105IPR009057Homeodomain-like
SMARTSM007172.0E-131060IPR001005SANT/Myb domain
PfamPF002494.1E-151158IPR001005SANT/Myb domain
CDDcd001676.32E-111358No hitNo description
Gene3DG3DSA:1.10.10.607.9E-2462113IPR009057Homeodomain-like
PROSITE profilePS5129417.9663113IPR017930Myb domain
SMARTSM007173.1E-1463111IPR001005SANT/Myb domain
PfamPF002499.3E-1464107IPR001005SANT/Myb domain
CDDcd001671.10E-1068109No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MERTNSRELK KGPWTRDEDQ KLLAYIQEHG HGSWRSLPAK AGLERCGKSC RLRWTNYLRP  60
DIKRGKLSTH EEKTIIRLHA LLGNRWSAIA AHLPKRTDNE IKNYWNTRLK KRLTRMGIDP  120
VTHKPKNIPG GSAQAANLSH MAQWETARLE AEARLARQSS SKLLPPPNDN LLLLHQFHRK  180
FNAAPPQRRN HHLVAPPCLD VLRAWQATTA VPDYSFFGSA ANVIESPTST LNFSCGSSTT  240
LTVPTVGAII ENDVMPTFNS YDVACVSGEE TGYADVDGKM ENLMQRHDQN SNLAYPVDLY  300
DCGDDMTASY DFAADNYNPN PSDMFSDSAA GALVGEFDDS KNYWNELLNL VSSSPMPML*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A8e-2881134108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtFunctions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01264.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2042010.0HQ204201.1 Mimulus guttatus pop-variant IM62 MYB transcription factor MIXTA-like 9 protein (MYBML9) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847598.10.0PREDICTED: myb-related protein 306-like
SwissprotQ9LE633e-91MY106_ARATH; Transcription factor MYB106
TrEMBLA0A022QQK30.0A0A022QQK3_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.13e-82myb domain protein 106
Publications ? help Back to Top
  1. Scoville AG,Barnett LL,Bodbyl-Roels S,Kelly JK,Hileman LC
    Differential regulation of a MYB transcription factor is correlated with transgenerational epigenetic inheritance of trichome density in Mimulus guttatus.
    New Phytol., 2011. 191(1): p. 251-63
    [PMID:21352232]