PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.L01204.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

MYB_related

Protein Properties

Length: 382aa MW: 43448.5 Da PI: 4.1415

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.L01204.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.6	2.5e-07	231	275	3	47
SS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqky 47 +WT++E++l+ ++v +gg Wk + ++ Rt+k+ +s+++++ Migut.L01204.1.p 231 KWTPDEEQLFHEVVFSNPGGdFWKVLGSVFP-SRTRKDFVSYYFNV 275 8****************99******.*********996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF01448	4.7E-5	125	234	IPR000949	ELM2 domain
SuperFamily	SSF46689	1.72E-5	229	276	IPR009057	Homeodomain-like
CDD	cd00167	2.10E-5	231	276	No hit	No description
Pfam	PF00249	9.0E-6	231	275	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence Send to blast
MGVKRPFEEE NLPELSFEQR IEDHNNKKLS FTPEDSPSTT APRFHYPGEF ENCVTDGACI 60 VDKESTPSAP LSLAASNGKQ EEEEEEEEYA GNIPDIDFRT PSMPPPLQFE DPYIYLLNTP 120 PRKEIPIGPD HQADVPEWDP FARRKDFSDE REQELMGSCI VRPPGLNRSG STDPFAAGRG 180 RTDCSCMDVG SMRCVQQHVH EAREKLQETM GDEVFVKLGF YDMGEEAASR KWTPDEEQLF 240 HEVVFSNPGG DFWKVLGSVF PSRTRKDFVS YYFNVFMLRR RGAQNRSFML QIDSDDEEEH 300 KSARELFGES RSLFGQDSDD EKDMKVDRDE YFYVVQDEGD EVESLDDVDL DVGWVDEYGP 360 HPENVGGGNK EDEVGQEGKS E*

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence Send to blast

MGVKRPFEEE NLPELSFEQR IEDHNNKKLS FTPEDSPSTT APRFHYPGEF ENCVTDGACI  60
VDKESTPSAP LSLAASNGKQ EEEEEEEEYA GNIPDIDFRT PSMPPPLQFE DPYIYLLNTP  120
PRKEIPIGPD HQADVPEWDP FARRKDFSDE REQELMGSCI VRPPGLNRSG STDPFAAGRG  180
RTDCSCMDVG SMRCVQQHVH EAREKLQETM GDEVFVKLGF YDMGEEAASR KWTPDEEQLF  240
HEVVFSNPGG DFWKVLGSVF PSRTRKDFVS YYFNVFMLRR RGAQNRSFML QIDSDDEEEH  300
KSARELFGES RSLFGQDSDD EKDMKVDRDE YFYVVQDEGD EVESLDDVDL DVGWVDEYGP  360
HPENVGGGNK EDEVGQEGKS E*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.L01204.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012847724.1	0.0	PREDICTED: uncharacterized protein LOC105967657
Refseq	XP_012847725.1	0.0	PREDICTED: uncharacterized protein LOC105967657
TrEMBL	A0A022QJF6	0.0	A0A022QJF6_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1514	16	25

Link Out ? help Back to Top
Phytozome	Migut.L01204.1.p