PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01053.1.p
Common NameMIMGU_mgv1a025086mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 281aa    MW: 31168.1 Da    PI: 7.4753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01053.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-08171218455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++iN+++  L++l+P +     k +  a +L   ++Y++sLq
  Migut.L01053.1.p 171 SHSLAERLRREKINDKLRCLQDLVPGC----YKTMGMAVMLDVIINYVRSLQ 218
                       8*************************8....355888888888888888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.58E-11165221No hitNo description
SuperFamilySSF474593.27E-16165235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.218167217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-15167228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.6E-6171218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-7173223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:2000488Biological Processpositive regulation of brassinosteroid biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MIMKEFSTIG HHNPNNKPNN SLSKMNISNM EVFSNLASSS SMVEGFNSTF HNNNNQGLFS  60
DHHHHHNHLP PMPFISDEIP RSAGPVFDQT AHFFASGNNG CINNMNGEPE IVLNLSPSVS  120
GTGFLGHGKV SKNHQEPSYG GKKRKRVSER EMEKPREVVH VRAKRGQATD SHSLAERLRR  180
EKINDKLRCL QDLVPGCYKT MGMAVMLDVI INYVRSLQNQ IDFLSMKLSA ASLFYDFNSS  240
DAEAMEALQG TNGYEAVQMV EKLVGEGYGG ISQFQAPWSL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01053.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078318.21e-119transcription factor bHLH75
TrEMBLA0A022RKN30.0A0A022RKN3_ERYGU; Uncharacterized protein
STRINGMigut.L01053.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA90691724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.12e-56bHLH family protein