PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00934.2.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family E2F/DP
Protein Properties Length: 184aa    MW: 20777.8 Da    PI: 10.0998
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00934.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP47.62.7e-153612471
           E2F_TDP 24 ivtlnevakeLvse......dvknkrRRiYDilNVLealnliek.....kekneirwkg 71
                       ++l+++ak L+ +       +++k+RR+YDi+NVL++++ iek     ++k+++rw g
  Migut.L00934.2.p  3 LISLEDAAKLLLGDgkhtsmTTRTKVRRLYDIANVLSSMKFIEKihhpeTRKPAFRWLG 61
                      699****************9999**********************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM013722.5E-7161IPR003316E2F/DP family, winged-helix DNA-binding domain
Gene3DG3DSA:1.10.10.109.8E-13463IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF023194.8E-12461IPR003316E2F/DP family, winged-helix DNA-binding domain
SuperFamilySSF467852.18E-81662IPR011991Winged helix-turn-helix DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005667Cellular Componenttranscription factor complex
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MDLISLEDAA KLLLGDGKHT SMTTRTKVRR LYDIANVLSS MKFIEKIHHP ETRKPAFRWL  60
GLNGKPDNGI VDSKKRIFGT DLTNTAKRFK VDEDGLQILK PVNLMRVKNE NENEDDRTTT  120
MGAKSYLFGP FAPANVPQVG VSNDYKGKQV VDWESLASTY RPKYHNQGIF LKLLISSYQN  180
IFS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00934.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837793.11e-134PREDICTED: E2F transcription factor-like E2FE isoform X2
TrEMBLA0A022QN481e-121A0A022QN48_ERYGU; Uncharacterized protein (Fragment)
TrEMBLA0A022RAA41e-121A0A022RAA4_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.L00934.1.p1e-131(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.11e-38DP-E2F-like 1