PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.L00834.1.p | ||||||||
Common Name | MIMGU_mgv1a020134mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 201aa MW: 23731 Da PI: 6.6065 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 40.4 | 3.7e-13 | 11 | 50 | 3 | 42 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42 i n+s+r+ tf k g+ KK +ELS+LC++eva+ii + Migut.L00834.1.p 11 IPNESKRNETFEKKTDGLVKKENELSTLCGVEVAIIIHKQ 50 889*********************************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00432 | 2.7E-8 | 1 | 60 | IPR002100 | Transcription factor, MADS-box |
PROSITE profile | PS50066 | 16.904 | 1 | 61 | IPR002100 | Transcription factor, MADS-box |
SuperFamily | SSF55455 | 1.78E-16 | 3 | 101 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 6.8E-10 | 3 | 23 | IPR002100 | Transcription factor, MADS-box |
Pfam | PF00319 | 1.9E-13 | 11 | 49 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 6.8E-10 | 23 | 38 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 6.8E-10 | 38 | 59 | IPR002100 | Transcription factor, MADS-box |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MARARTKHEL IPNESKRNET FEKKTDGLVK KENELSTLCG VEVAIIIHKQ RHHRYDLGED 60 NAMLWPSPPI FRDRLHKFLD CSDFKKRRRM VKHEKFMEQI TKKERENVSK WERRCELQES 120 RQLMNELREQ DHMDDYFNEV ELYHLNGLNS LVENMLTKLE TTSMNVLENL RHDEWFLGAM 180 SEDPPPPPSD AGGSVNMPNL * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.L00834.1.p |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831231.1 | 1e-148 | PREDICTED: agamous-like MADS-box protein AGL86 | ||||
TrEMBL | A0A022RQR6 | 1e-140 | A0A022RQR6_ERYGU; Uncharacterized protein (Fragment) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA378 | 20 | 129 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65300.1 | 2e-14 | AGAMOUS-like 38 |
Link Out ? help Back to Top | |
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Phytozome | Migut.L00834.1.p |