PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.L00355.1.p | ||||||||
Common Name | LOC105964135, MIMGU_mgv1a025465mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WOX | ||||||||
Protein Properties | Length: 322aa MW: 37070.1 Da PI: 9.7694 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 72.9 | 3.7e-23 | 67 | 126 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Lee++++ +r+psae+++++A+kl +++ ++V++WFqN++a+e++ Migut.L00355.1.p 67 TRWNPTPEQLQALEEMYKRgTRTPSAEQIQQIAAKLrrfgKIEGKNVFYWFQNHKARERQ 126 8*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 114.9 | 4e-37 | 66 | 128 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +tRW+PtpeQ++ Lee+yk+G+rtP++e+iq+i+a+L+++Gkie+kNVfyWFQN+kaRerqk+ Migut.L00355.1.p 66 STRWNPTPEQLQALEEMYKRGTRTPSAEQIQQIAAKLRRFGKIEGKNVFYWFQNHKARERQKK 128 79***********************************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00389 | 5.1E-7 | 64 | 131 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 3.15E-14 | 66 | 132 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 7.81E-8 | 67 | 128 | No hit | No description |
Pfam | PF00046 | 9.2E-21 | 67 | 126 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 3.2E-10 | 67 | 126 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 11.985 | 72 | 127 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MWMAEADRKL RPLMPRPISS CSHFSTISNP SCCCIHNPNI LPWNHQISGM SEYGVKREIQ 60 TMPLVSTRWN PTPEQLQALE EMYKRGTRTP SAEQIQQIAA KLRRFGKIEG KNVFYWFQNH 120 KARERQKKRR QLDLQLHPAR KNQTGLMSRR YFEIEHHKKL STPSNCSAPN SEDSAASMQY 180 GTAIAECKKD EWTHLRQNKI NVTTAKNESS CWKLDTILHT AAQNPALERE HNNHKPPFAT 240 TTTNSSLNLS ILLSPKIDDI NFLEDEKSSS LTETTRETRT LLQLFPIRST DLGTREEVGI 300 RDISTRFTPN HQFIEFLPTK N* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.L00355.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012844100.1 | 0.0 | PREDICTED: WUSCHEL-related homeobox 6-like | ||||
TrEMBL | A0A022QW66 | 0.0 | A0A022QW66_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4681 | 23 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18010.1 | 3e-38 | WUSCHEL related homeobox 1 |
Link Out ? help Back to Top | |
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Phytozome | Migut.L00355.1.p |
Entrez Gene | 105964135 |