PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00296.1.p
Common NameLOC105967834, MIMGU_mgv1a003577mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 577aa    MW: 62867.6 Da    PI: 6.0645
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00296.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS298.22.1e-912105752374
              GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       v+ L++ Ae++++++l+l q +Larl+++ +sp+g+p+qR+a+yf+eAL++ l++     +   +  ++s+++ +++++a+k+fs vsP++ f
  Migut.L00296.1.p 210 VDELIRLAECFETNSLQLGQVILARLNQRlRSPAGKPIQRAAFYFKEALQSLLTG-----STRPSHHAASSSEIIQTIKAQKTFSSVSPVPMF 297
                       678*************************99*************************.....333344445555699****************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp......egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                       + +taNqa+lea++g+  vH+iDfdi+ G++W++++++La+++      ++pp lRi +++++e   + e + ++e+L+ fA+ l+++fe ++
  Migut.L00296.1.p 298 AGFTANQAVLEAMDGSMSVHVIDFDIGIGGHWASFMKELADKAaesrraAPPPALRISALVPEE--YAAESRLIRENLTAFARDLNIRFEVEF 388
                       ****************************************9886666667799*********66..99999********************** PP

              GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh...nsesFlerflealeyysalfds 270
                       + +++++ l++++ ++  gE++aV l+ +++r +          +e+L+ ++++sP+vvv+v+ e ++   +++s+ + +++ le+ys+l++s
  Migut.L00296.1.p 389 VPVRTFQYLSFKAVKFADGEKVAVLLSPAIFRHV---------GTEFLNDLRRISPHVVVHVDVEGQMgfgTAPSYRQAVIDGLEFYSTLLES 472
                       *9******************************98.........468*******************7764455679****************** PP

              GRAS 271 l.eaklpres.....eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
                       l +a++ +       e+++ +E ++l ++iv+ v ++g++          Wre+l +aG+++v+ls++++ qa++llr+v+++g++v +++++
  Migut.L00296.1.p 473 LeAANFNNGGaggggEWMRRIETFVLYPKIVEGVEAAGRR-------GTPWREALVAAGLRQVALSQFTEFQAECLLRRVQVRGFHVYKRQAE 558
                       *555544433556669**********************98.......789******************************************* PP

              GRAS 358 lvlgWkdrpLvsvSaWr 374
                       ++l+W++rpLv++SaWr
  Migut.L00296.1.p 559 MLLCWHERPLVATSAWR 575
                       ****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098539.075183555IPR005202Transcription factor GRAS
PfamPF035147.3E-89210575IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0030154Biological Processcell differentiation
GO:0048831Biological Processregulation of shoot system development
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    Send to blast
MKVPFPAANN HNTSKPAPSS NSATTNAAAP APPSAAAAAH SSSSSSPNYE PKSVLELRGS  60
PSPVSGKPNS DFLIGGGGGG GGDRLIELED HVLNNIEHPQ LEDWDSLMRD LGLHDDFNPV  120
SKPFSSSSQS DLTHQITHNI NNNNNNNNIH YSELAEFPPV TSFESTQFAA ADFGLLPDIP  180
IYSSAAPPTS FEGLSGDANN NNWNVGFDYV DELIRLAECF ETNSLQLGQV ILARLNQRLR  240
SPAGKPIQRA AFYFKEALQS LLTGSTRPSH HAASSSEIIQ TIKAQKTFSS VSPVPMFAGF  300
TANQAVLEAM DGSMSVHVID FDIGIGGHWA SFMKELADKA AESRRAAPPP ALRISALVPE  360
EYAAESRLIR ENLTAFARDL NIRFEVEFVP VRTFQYLSFK AVKFADGEKV AVLLSPAIFR  420
HVGTEFLNDL RRISPHVVVH VDVEGQMGFG TAPSYRQAVI DGLEFYSTLL ESLEAANFNN  480
GGAGGGGEWM RRIETFVLYP KIVEGVEAAG RRGTPWREAL VAAGLRQVAL SQFTEFQAEC  540
LLRRVQVRGF HVYKRQAEML LCWHERPLVA TSAWRY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A8e-2421557425378Protein SCARECROW
5b3h_A8e-2421557424377Protein SCARECROW
5b3h_D8e-2421557424377Protein SCARECROW
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00296.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847887.10.0PREDICTED: scarecrow-like protein 15
TrEMBLA0A022QKV70.0A0A022QKV7_ERYGU; Uncharacterized protein
STRINGMigut.L00296.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA83052230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-132GRAS family protein