PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00183.1.p
Common NameLOC105961089, MIMGU_mgv1a011398mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 284aa    MW: 30538.6 Da    PI: 9.0602
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00183.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.63.3e-19954147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +g+W++eEd+ll  +v+++G+++W++I+r ++ gR++k+c++rw + 
  Migut.L00183.1.p  9 KGPWSPEEDDLLQSLVQRHGPRNWTLISRSIP-GRSGKSCRLRWCNQ 54
                      79******************************.***********985 PP
2Myb_DNA-binding53.94.2e-1763105347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       ++T+eEd+ +++a+ ++G++ W+tIar +  gRt++ +k++w++ 
  Migut.L00183.1.p  63 PFTPEEDDAIIRAHSRFGNK-WATIARLLS-GRTDNAIKNHWNST 105
                       89******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129424.029459IPR017930Myb domain
SuperFamilySSF466894.49E-326102IPR009057Homeodomain-like
SMARTSM007171.5E-14857IPR001005SANT/Myb domain
PfamPF002497.5E-19954IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.4E-251062IPR009057Homeodomain-like
CDDcd001671.00E-151153No hitNo description
SMARTSM007179.1E-1560108IPR001005SANT/Myb domain
PROSITE profilePS5129421.16661110IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.2E-2263109IPR009057Homeodomain-like
PfamPF002492.3E-1463105IPR001005SANT/Myb domain
CDDcd001673.33E-1263106No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MAGNMDRIKG PWSPEEDDLL QSLVQRHGPR NWTLISRSIP GRSGKSCRLR WCNQLCPHVE  60
HRPFTPEEDD AIIRAHSRFG NKWATIARLL SGRTDNAIKN HWNSTLKRKS ASLSFSSDGG  120
GGGVGSERPL KRSVSAGSGL PVSGLYLSPG SPSISDGCNS SLQVVVPPID DPPTGLSLSL  180
PGVESTESTT SHRTESTQPK MNPVQLTLPL LTTPPPPPPP QLGLSSELMA VMQEMIRAEV  240
RSYMIMGGVE QQQKMGICVQ LGNNANEGFR NNAAMKGVGI SRD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A1e-3881093104MYB PROTO-ONCOGENE PROTEIN
1h88_C6e-38810957158MYB PROTO-ONCOGENE PROTEIN
1h89_C6e-38810957158MYB PROTO-ONCOGENE PROTEIN
1mse_C9e-3981093104C-Myb DNA-Binding Domain
1msf_C9e-3981093104C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00183.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840782.10.0PREDICTED: transcription factor MYB44-like
SwissprotO231601e-88MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A022R3N00.0A0A022R3N0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15862471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.11e-84myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]