PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00108.1.p
Common NameLOC105972946, MIMGU_mgv1a009524mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 340aa    MW: 37471.1 Da    PI: 6.6291
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00108.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20160210256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+t eeAa a+++a+ kl+ge
  Migut.L00108.1.p 160 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTSEEAALAYDKAAYKLRGE 210
                       59******9.**********965...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.49E-33159219No hitNo description
SuperFamilySSF541716.47E-23160218IPR016177DNA-binding domain
PROSITE profilePS5103223.117160217IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.1E-32160218IPR001471AP2/ERF domain
SMARTSM003804.0E-37160223IPR001471AP2/ERF domain
PRINTSPR003677.4E-11161172IPR001471AP2/ERF domain
PfamPF008471.3E-14161210IPR001471AP2/ERF domain
PRINTSPR003677.4E-11183199IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MAAAIDIYGC NNNQAFSTDP FREELMQALQ PFMKSASPSA SASASSDLFL SPLSPSLSST  60
SSSSSSNLYN TEFGSLPQKA QIFSPGFSNF PQIVDNHQPA NQINLNHLTP SQILQIQAQF  120
HFQQQELNHK YNQFSSFLRP KPVSMKQTGP GLTPSKPVKL YRGVRQRHWG KWVAEIRLPK  180
NRTRLWLGTF DTSEEAALAY DKAAYKLRGE FAKLNFPHLR HQLLQESSTF KPLPSSVDAK  240
LNAICENLAS ANSKKPDKKI ESLSEKTVLV SVSAAENEAA MKVEASISVD DASSSSSGTA  300
SPQSDITCLD FMTDTFFDDE CENLFLQKFP SVEIDWAAL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-21159217160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00108.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853381.10.0PREDICTED: ethylene-responsive transcription factor RAP2-13-like
TrEMBLA0A022Q7U90.0A0A022Q7U9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16102471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.16e-48ERF family protein