PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00033.1.p
Common NameLOC105973107, MIMGU_mgv1a009982mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 326aa    MW: 35659.7 Da    PI: 5.0405
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00033.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.78.6e-20243277135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+tkTp+WR gp g+ktLCnaCG+++++ +l
  Migut.L00033.1.p 243 CSHCGVTKTPQWRAGPLGSKTLCNACGVRFKSGRL 277
                       *******************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0169921.1E-8019319IPR016679Transcription factor, GATA, plant
SMARTSM004013.3E-15237291IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.123237273IPR000679Zinc finger, GATA-type
SuperFamilySSF577166.65E-15239300No hitNo description
Gene3DG3DSA:3.30.50.105.3E-15241275IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.30E-15242290No hitNo description
PROSITE patternPS003440243268IPR000679Zinc finger, GATA-type
PfamPF003201.7E-17243277IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MECVQGALVG GFEPETVFKS TAAFMEDFLG SNGVPNAVSG DDLFVDELLD FSNDFSEEEE  60
IEEDEKPLQP EEFEHHKNKF CSVSQQMQTP PEKSGLSAND DFDSLPETEL PLPAEGLESL  120
EWLSHFVEDS FSDYSLTGKL PPNPASKRPE TVTAAQEQPC FTTPVQTKAR TKRARTGVRV  180
WPVLSPSFTE SSTSSSSSSS TTSLSPQYAW TGESFLGYPP PVKKQKKKRA DSGAAVPAQP  240
RRCSHCGVTK TPQWRAGPLG SKTLCNACGV RFKSGRLLPE YRPACSPTFS TEMHSNNHRK  300
VLEMRRKKES ETEAPAGVGP PVQSF*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00033.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853575.10.0PREDICTED: GATA transcription factor 5 isoform X1
RefseqXP_012853576.10.0PREDICTED: GATA transcription factor 5 isoform X2
SwissprotQ9FH574e-74GATA5_ARATH; GATA transcription factor 5
TrEMBLA0A022Q8Z60.0A0A022Q8Z6_ERYGU; GATA transcription factor
STRINGMigut.L00033.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA11542481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.29e-74GATA transcription factor 5