PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01330.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family AP2
Protein Properties Length: 370aa    MW: 42254 Da    PI: 8.8453
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01330.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.74.5e-1166122155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+++GV+ ++++gr++A+++d  s+n   k+k  + g ++ +e Aa+a++ a++k++g
  Migut.K01330.1.p  66 SRFRGVSKHRWTGRYEAHLWDkLSWNVtqKKKGKQ-GAYDEEEAAARAYDLAALKYWG 122
                       789******************88887784446666.9*******************98 PP
2AP252.51.2e-16165216155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g
  Migut.K01330.1.p 165 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 216
                       89****99**********99966...3.6*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.9E-866122IPR001471AP2/ERF domain
SuperFamilySSF541713.86E-1466132IPR016177DNA-binding domain
SMARTSM003801.6E-1767136IPR001471AP2/ERF domain
PROSITE profilePS5103217.87367130IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-1167131IPR001471AP2/ERF domain
PRINTSPR003672.6E-56879IPR001471AP2/ERF domain
PfamPF008474.4E-12165216IPR001471AP2/ERF domain
CDDcd000185.30E-25165226No hitNo description
SuperFamilySSF541715.89E-18165226IPR016177DNA-binding domain
PROSITE profilePS5103218.953166224IPR001471AP2/ERF domain
SMARTSM003802.4E-27166230IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-18166225IPR001471AP2/ERF domain
PRINTSPR003672.6E-5206226IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MIMVKSEETL GKRCMHEEVE GGAYKAIRCV KRRRRDTKDR KEIQQNESGP ANVSSGIKTT  60
TVKRSSRFRG VSKHRWTGRY EAHLWDKLSW NVTQKKKGKQ GAYDEEEAAA RAYDLAALKY  120
WGASTFTNFP ISDYEKEIEI MQNLTKEEYL ASLRRKSSGF SRGVSKYRGV ARHHHNGRWE  180
ARIGRVFGNK YLYLGTYSTQ EEAARAYDIA AIEYRGINAV TNFDLSSYIQ WLKPQANNSS  240
SPTEEETKPL FTQSRGAFSS FHTDDKLHGG RKISSSSYGK PSSPTALGLL LRSSVFKELV  300
EKNSNLSEEE SSDDDENNMK INKQSEVSSK DEYDDLFCDI PFEFQRQFHY DYDYSEMIGA  360
DTVGIAPIW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01330.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840471.10.0PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700
TrEMBLA0A022R3690.0A0A022R369_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34402145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.36e-76AP2 family protein