PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01320.1.p
Common NameLOC105960954, MIMGU_mgv1a008126mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Dof
Protein Properties Length: 385aa    MW: 41882.6 Da    PI: 4.986
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01320.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.57.2e-39101160261
            zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                       ++k+l+cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grr+nk++
  Migut.K01320.1.p 101 PDKILPCPRCNSMETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRRNKNV 160
                       7899*****************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-3088158IPR003851Zinc finger, Dof-type
PfamPF027011.8E-31103159IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.779105159IPR003851Zinc finger, Dof-type
PROSITE patternPS013610107143IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MAEVKDPKIK LFGKTIELPE TSAAAAAAEE NVVAAQSCEA AGDDSSNQDP PCSSNSNGDA  60
EDQESLKIHS GPKQDDVKEK DQTEQDQSET ENSDEKALKK PDKILPCPRC NSMETKFCYF  120
NNYNVNQPRH FCKNCQRYWT AGGTMRNVPV GAGRRRNKNV GPTQLRHQNV PPEALQTLRP  180
NPNPSNPTLC ESMVSVLNIA DKKIPNKGDE PSKGETGLHE KLPNCPPYFP GAAWPNYPWQ  240
VVPLYPTPPP PFWGCTVQPL QPWSVPWVIP QMPSSSGGPN SPTLGKRNLD EEEIQESEGK  300
SEKLLWVPKT LRIDDPGEAA KSSIWATLGI KNDGGVDSSG GGLFEPFERG TKSDEKVPEA  360
STTALQANPA AMSRSVSFRE SSSS*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Regulates a photoperiodic flowering response. Transcriptional repressor of 'CONSTANS' expression. The stability of CDF2 is controlled by 'GIGANTEA' and redundantly by ADO3, ADO2 and/or ADO1. {ECO:0000250, ECO:0000269|PubMed:19619493}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00046PBMTransfer from AT5G39660Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01320.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Circadian-regulation. Highly expressed at the beginning of the light period, then decreases, reaching a minimum between 16 and 29 hours after dawn before rising again at the end of the day. Regulated at the protein level by ADO3 and GI pos-transcriptionally. {ECO:0000269|PubMed:19619493}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840628.10.0PREDICTED: cyclic dof factor 2-like
SwissprotQ93ZL53e-86CDF2_ARATH; Cyclic dof factor 2
TrEMBLA0A022R7050.0A0A022R705_ERYGU; Uncharacterized protein
STRINGMigut.K01320.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53224122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.23e-69cycling DOF factor 2
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]