PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01092.1.p
Common NameLOC105953393, MIMGU_mgv1a002409mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 679aa    MW: 76451.2 Da    PI: 6.6405
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01092.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.71.1e-192277156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +++ +++t+eq+++Le++++++++p++++r++L+++lgL+++q+k+WFqN+R++ k
  Migut.K01092.1.p 22 KKQYHRHTTEQIQQLEAFYNECPHPDKNQRQQLSRELGLDQKQIKFWFQNKRTQIK 77
                      688999**********************************************9877 PP
2START138.66.6e-441954153206
                       HHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
             START   3 aeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                       a +a++el+ +  ++ep+W++ +       + +d +  +f++s+       + e +++sg v m ++ l e+l+d++ +W+e+++    ka+t
  Migut.K01092.1.p 195 AVAAMNELLELLRVNEPLWFEAPsdhgrYTLRRDSYDMIFPKSNQvntssARFESSKDSGEVAMSATHLIETLVDVN-KWKENFPtivtKATT 286
                       7899*******************77776666677777777776669999999*************************.*************** PP

                       EEEECTT...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
             START  82 levissg...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                       le+i++g   g l+lm+++   lsplv+ R+f f+Ry+rq +  +wv+vdvS +  ++ + +s   R+ ++pSg++i++ sng+s+vtw+ehv
  Migut.K01092.1.p 287 LEAIDTGifgGLLHLMYQKIHILSPLVApREFFFIRYSRQINSSTWVLVDVSYNFITQLQ-DSVPTRSWRFPSGCIIQDISNGKSTVTWIEHV 378
                       ***************************99***********************99999988.88899*************************** PP

                       E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                        ++++l  h l+r +v  ++a gak+w  tlqr ce+
  Migut.K01092.1.p 379 QVDDKLStHRLYRDFVCGSQAYGAKRWITTLQRMCER 415
                       *******9***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-20981IPR009057Homeodomain-like
SuperFamilySSF466891.5E-181280IPR009057Homeodomain-like
PROSITE profilePS5007116.8761979IPR001356Homeobox domain
SMARTSM003894.5E-182183IPR001356Homeobox domain
CDDcd000863.00E-172280No hitNo description
PfamPF000463.2E-172277IPR001356Homeobox domain
PROSITE patternPS0002705477IPR017970Homeobox, conserved site
PROSITE profilePS5084842.025184418IPR002913START domain
SuperFamilySSF559615.63E-28186416No hitNo description
CDDcd088753.32E-90188414No hitNo description
SMARTSM002349.1E-28193415IPR002913START domain
PfamPF018521.8E-36195415IPR002913START domain
Gene3DG3DSA:3.30.530.201.6E-8251385IPR023393START-like domain
SuperFamilySSF559611.18E-8475670No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 679 aa     Download sequence    Send to blast
MDLSNRGNGS GDEENCNSRE GKKQYHRHTT EQIQQLEAFY NECPHPDKNQ RQQLSRELGL  60
DQKQIKFWFQ NKRTQIKAQN ERADSNSLRS ENERIHFENL SMHEALKNAF CPSCNSSGVC  120
EEEKRENLQR LRIENARLKE EHERAVNFLT NYMGNLILPS VGTEPSASAP GQQYMSQHWS  180
TSVTHVDKSV IIETAVAAMN ELLELLRVNE PLWFEAPSDH GRYTLRRDSY DMIFPKSNQV  240
NTSSARFESS KDSGEVAMSA THLIETLVDV NKWKENFPTI VTKATTLEAI DTGIFGGLLH  300
LMYQKIHILS PLVAPREFFF IRYSRQINSS TWVLVDVSYN FITQLQDSVP TRSWRFPSGC  360
IIQDISNGKS TVTWIEHVQV DDKLSTHRLY RDFVCGSQAY GAKRWITTLQ RMCERFAFSN  420
GLIATPTNEL EGVIESLEGK RNVMNLSQRM VESFFEVLCM SDKLDFPNPS EYQYSGVCVA  480
LRKSDGPHQP DGFIVSAATS LWLPFSKEHL FNFFQDEKRR AQWDVLSNGS PVIPVAHIST  540
GTRPGNRISI IQPFVPKENK MLVLQESSID SLGAAIIYAP MDLKALLSVV NGDDTMKIPI  600
LPSGFVISTD GRASSRGTNG ASTSSNTGSG GSLLTVAFQI LICHSQLTSQ LNMESVATVH  660
TLISSSIKKI KEALDYYD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01092.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832506.10.0PREDICTED: homeobox-leucine zipper protein HDG11-like isoform X1
TrEMBLA0A022RNN20.0A0A022RNN2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10211732
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0homeodomain GLABROUS 11