PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01088.1.p
Common NameMIMGU_mgv1a010009mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 326aa    MW: 37811.1 Da    PI: 7.3595
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01088.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.21.8e-202277156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +++ +++t+eq+++Le++++++++p++++r++L+++lgL+++q+k+WFqN+R+++k
  Migut.K01088.1.p 22 KKQYHRHTTEQIQQLEAFYNECPHPDKNQRQQLSRELGLDQKQIKFWFQNKRTQMK 77
                      688999***********************************************998 PP
2START32.61.8e-11195307389
                       HHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
             START   3 aeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                       a +a++el+ +  ++ep+W++ +       + +d +  +f++s+       + e +++sg v m ++ l e l+d++ +W+e ++    ka+t
  Migut.K01088.1.p 195 AVAAMNELLELLRVNEPLWFEAPsdhgrYTLRRDSYDMIFPKSNQvntssARFESSKDSGEVAMSATHLIEMLVDVN-KWKEIFPtivtKATT 286
                       7899*******************77776666677777777776669999999*************************.*************** PP

                       EEEECTT.............E CS
             START  82 levissg.............g 89 
                       le+i++g             +
  Migut.K01088.1.p 287 LEAIDTGifggllhlgrtskN 307
                       *******99755444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-20880IPR009057Homeodomain-like
SuperFamilySSF466896.84E-191279IPR009057Homeodomain-like
PROSITE profilePS5007116.6651979IPR001356Homeobox domain
SMARTSM003894.8E-182183IPR001356Homeobox domain
CDDcd000863.24E-162277No hitNo description
PfamPF000464.9E-182277IPR001356Homeobox domain
PRINTSPR000317.5E-55059IPR000047Helix-turn-helix motif
PROSITE patternPS0002705477IPR017970Homeobox, conserved site
PRINTSPR000317.5E-55975IPR000047Helix-turn-helix motif
PROSITE profilePS5084816.15184293IPR002913START domain
SuperFamilySSF559611.68E-6186318No hitNo description
PfamPF018521.9E-6195307IPR002913START domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MDLSNRRNGS GDEENYNSRE GKKQYHRHTT EQIQQLEAFY NECPHPDKNQ RQQLSRELGL  60
DQKQIKFWFQ NKRTQMKALN ERADNNSLRS ENQRIHFENL SMHEVLKNAF CPSCNNSGVC  120
EEEKRQNLQR LRIENARRKE EYERAVNFFT NYTGNPALPF AGTEPSTSAP GQQYMSQHWS  180
TSLTHVDKSV IIETAVAAMN ELLELLRVNE PLWFEAPSDH GRYTLRRDSY DMIFPKSNQV  240
NTSSARFESS KDSGEVAMSA THLIEMLVDV NKWKEIFPTI VTKATTLEAI DTGIFGGLLH  300
LGRTSKNSYY YYYHYIFGIS ERIKN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01088.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832510.10.0PREDICTED: homeobox-leucine zipper protein ROC8-like
TrEMBLA0A022RNN70.0A0A022RNN7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10211732
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.11e-72homeodomain GLABROUS 11