PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01087.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 562aa    MW: 64626.2 Da    PI: 7.7101
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01087.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox628.7e-202277156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +++ +++t+eq+++Le++++++++p++++r++L+++lgL+++q+k+WFqN+R++ k
  Migut.K01087.1.p 22 KKQYHRHTTEQIQQLEAFYNECPHPDKNQRQQLSRELGLDQKQIKFWFQNKRTQIK 77
                      688999**********************************************9877 PP
2START136.82.4e-431964163206
                       HHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
             START   3 aeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                       a +a++el+ +  ++ep+W + +       + +d +  +f++s+       + e +++sg v m ++ l e l+d++ +W+e ++    ka+t
  Migut.K01087.1.p 196 AVAAMNELMELLRVNEPLWIEAPsdhgrCTLRRDSYDMIFPKSNQvntssARFESSKDSGEVAMSATHLIEMLVDVN-KWKEIFPtivtKATT 287
                       7899*******************88887777788888888887778999999*************************.*************** PP

                       EEEECTT...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
             START  82 levissg...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                       levi++g   g l+lm++++  lsplv+ R+f f+Ry rq +  +wv+vdvS d  ++ + +s   R+ ++pSg++i++ sng+s+vtw+ehv
  Migut.K01087.1.p 288 LEVIDTGifgGLLHLMYQKMHILSPLVApREFFFIRYFRQINSSTWVLVDVSYDFITQLQ-DSVPTRSWRFPSGCIIQDISNGKSTVTWIEHV 379
                       ***************************99**************************99998.8999**************************** PP

                       E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                        ++++l  h l+r +v  ++a gak+w  tlqr ce+
  Migut.K01087.1.p 380 QVDDKLStHRLYRDFVCGSQAYGAKRWIITLQRMCER 416
                       *******9***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.9E-20878IPR009057Homeodomain-like
SuperFamilySSF466891.92E-181278IPR009057Homeodomain-like
PROSITE profilePS5007116.521979IPR001356Homeobox domain
SMARTSM003896.0E-182183IPR001356Homeobox domain
CDDcd000862.61E-162277No hitNo description
PfamPF000462.5E-172277IPR001356Homeobox domain
PROSITE patternPS0002705477IPR017970Homeobox, conserved site
PROSITE profilePS5084842.368185419IPR002913START domain
SuperFamilySSF559612.88E-29187417No hitNo description
CDDcd088751.42E-92189415No hitNo description
SMARTSM002341.4E-27194416IPR002913START domain
PfamPF018524.5E-36196416IPR002913START domain
Gene3DG3DSA:3.30.530.201.1E-8252385IPR023393START-like domain
SuperFamilySSF559613.85E-5440540No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 562 aa     Download sequence    Send to blast
MDLSNRRNGS GDEENYNSRN GKKQYHRHTT EQIQQLEAFY NECPHPDKNQ RQQLSRELGL  60
DQKQIKFWFQ NKRTQIKALN GRADNNSLRS ENERFHFENL SMHEALKNAF CPSCNNSSGV  120
CEEEKRQNLQ RLRIENARLK EEHERAVNFL TNYMGNPILP SVGTEPSTSA PGQQYMSQHW  180
STSVTHVDKS VIIETAVAAM NELMELLRVN EPLWIEAPSD HGRCTLRRDS YDMIFPKSNQ  240
VNTSSARFES SKDSGEVAMS ATHLIEMLVD VNKWKEIFPT IVTKATTLEV IDTGIFGGLL  300
HLMYQKMHIL SPLVAPREFF FIRYFRQINS STWVLVDVSY DFITQLQDSV PTRSWRFPSG  360
CIIQDISNGK STVTWIEHVQ VDDKLSTHRL YRDFVCGSQA YGAKRWIITL QRMCERFAFS  420
NGLIATPTNE LEGVIESLEG KRNVMNLSRR MVESFFEVLC MSDKLDFPNP SEYQNSGVCV  480
SLRKSNGPHQ PDGFIVSAAT SLWLPFSKEH LFNFFQDEKR RAQWDVLSQP GHIPEIVSPS  540
SSLLCPKKIR WWCCKRVAST L*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01087.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832509.10.0PREDICTED: homeobox-leucine zipper protein HDG11-like
TrEMBLA0A022RJ860.0A0A022RJ86_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10211732
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.11e-147homeodomain GLABROUS 11