PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01079.1.p
Common NameLOC105956273, MIMGU_mgv1a022472mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 679aa    MW: 76428.2 Da    PI: 6.7195
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01079.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.91.9e-192277156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +++ +++t+eq+++Le++++++++p++++r++L+++lgL+++q+k+WFqN+R++ k
  Migut.K01079.1.p 22 KKQYHRHTTEQIQQLEAFYNECPHPDKNQRQQLSRELGLDQNQIKFWFQNKRTQTK 77
                      688999**********************************************9987 PP
2START136.52.7e-431954153206
                       HHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
             START   3 aeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                       a +a++el+ +  ++ep+W++ +       + +d +  +f++s+       + e +++sg v m ++ l e l+d++ +W+e ++    ka+t
  Migut.K01079.1.p 195 AVAAMNELMELLRVNEPLWFEAPsehgrYTLRRDSYDMIFPKSNQvntssARFESSKDSGEVAMSATHLIEMLVDVN-KWKEIFPtivtKATT 286
                       7899*******************65555555555555566665559999999*************************.*************** PP

                       EEEECTT...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
             START  82 levissg...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                       le+i++g   g l+lm++++  lsplv+ R+f f+Ry+rq +  +wv+vdvS d  ++ + +s   R+ ++pSg++i++ sng+s+vtw+ehv
  Migut.K01079.1.p 287 LEAIDTGifgGLLHLMYQKMHILSPLVApREFFFIRYSRQINSSTWVLVDVSYDFITQLQ-DSVPTRSWRFPSGCIIQDISNGKSTVTWIEHV 378
                       ***************************99**************************99998.8999**************************** PP

                       E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                        ++++l  h l+r +v  ++a gak+w   lqr ce+
  Migut.K01079.1.p 379 QVDDKLStHRLYRDFVCGSQAYGAKRWITSLQRMCER 415
                       *******9***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.5E-20980IPR009057Homeodomain-like
SuperFamilySSF466893.05E-181178IPR009057Homeodomain-like
PROSITE profilePS5007116.4221979IPR001356Homeobox domain
SMARTSM003896.1E-172183IPR001356Homeobox domain
PfamPF000465.4E-172277IPR001356Homeobox domain
CDDcd000861.19E-162277No hitNo description
PROSITE patternPS0002705477IPR017970Homeobox, conserved site
PROSITE profilePS5084842.295184418IPR002913START domain
SuperFamilySSF559615.91E-28188416No hitNo description
CDDcd088751.60E-90188414No hitNo description
SMARTSM002342.0E-27193415IPR002913START domain
PfamPF018524.5E-36195415IPR002913START domain
Gene3DG3DSA:3.30.530.201.8E-8251385IPR023393START-like domain
SuperFamilySSF559617.55E-11472671No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 679 aa     Download sequence    Send to blast
MDLSNRGNGS GDEENYNSRN GKKQYHRHTT EQIQQLEAFY NECPHPDKNQ RQQLSRELGL  60
DQNQIKFWFQ NKRTQTKALN ERADNNSLRS ENERIHFENL SMHEALKNAF CPSCNSSGVC  120
EEEKRQNLQR LRIENAHLKE EHERAVNFLT NYMGNPILPS VGTEPSTSAP GEQYMSQHWS  180
TSVTHVDQSV IIETAVAAMN ELMELLRVNE PLWFEAPSEH GRYTLRRDSY DMIFPKSNQV  240
NTSSARFESS KDSGEVAMSA THLIEMLVDV NKWKEIFPTI VTKATTLEAI DTGIFGGLLH  300
LMYQKMHILS PLVAPREFFF IRYSRQINSS TWVLVDVSYD FITQLQDSVP TRSWRFPSGC  360
IIQDISNGKS TVTWIEHVQV DDKLSTHRLY RDFVCGSQAY GAKRWITSLQ RMCERFAFSN  420
GLIATPTNEL EGVIESLEGK RNVMTLSQRM VESFFEVLCM SDKLDFPNPL EYHNSGVCVA  480
LRKSNGPHQP DGFIVSAATS LWLPFSKEHL FNFFHDEKRR AQWDALSNGN PVTTVAHIST  540
GTHPGNRISI IQPFLPKENK MVVLQESSID SLGAAIIYAP MDLKALLSVV NGEDATKIPI  600
LPSGFVISTD GRASSRGTNG ASTSSNTGSG GSLLTVAFQI LICHSQLTTQ LNMESVATVH  660
TLISSTVKKI KAALHYYD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01079.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832516.10.0PREDICTED: homeobox-leucine zipper protein HDG11-like isoform X1
TrEMBLA0A022RJ860.0A0A022RJ86_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10211732
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0homeodomain GLABROUS 11