PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00894.1.p
Common NameLOC105958973, MIMGU_mgv1a003644mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 573aa    MW: 61471.4 Da    PI: 4.8385
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00894.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS452.92.1e-1381995671374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       lv++L++cAeav++++++la+al++++  la ++  +m+++a+yf+eALa+r+++        ++p e  +++ s++l++   f+e+ P+lkf
  Migut.K00894.1.p 199 LVHTLMACAEAVQQENMKLADALVKHVGVLAVSQVGAMRKVATYFAEALARRIYK--------VSPPEPLDSSYSDVLQM--HFYETGPYLKF 281
                       689***************************************************9........43333333445555544..5********** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                       +h+taNqaIlea++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tgvg+p+++++++l+++g++La++Ae++gv+fef+ +va++l
  Migut.K00894.1.p 282 AHFTANQAILEAFAGADRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGVGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSL 374
                       ********************************************************************************************* PP

              GRAS 187 edleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak... 274
                       +dl+ ++L ++   +Ea+aVn+v++lhrll+++++le+    vL+ ++ ++Pk+v+vveqea+hn++ Fl+rf eal+yys++fdsle+    
  Migut.K00894.1.p 375 ADLDANMLGIRAggEEAVAVNSVFELHRLLSRPGALEK----VLNSIRAMNPKIVTVVEQEANHNGGVFLDRFNEALHYYSTMFDSLESCggv 463
                       ************999*********************99....*********************************************987778 PP

              GRAS 275 ...lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWk 363
                          lp++  ++ ++ +++lgr+i+nvvac ga+r+erhetl +Wr+r+++aGF+p++l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW+
  Migut.K00894.1.p 464 tqqLPPNGGQDLVMTEVYLGRQICNVVACDGADRVERHETLPQWRRRMGSAGFEPAHLGSNAHKQASMLLALFAgGDGYRVEENEGCLMLGWH 556
                       88899999************************************************************************************* PP

              GRAS 364 drpLvsvSaWr 374
                       +rpL+++SaWr
  Migut.K00894.1.p 557 TRPLIATSAWR 567
                       **********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF120417.1E-3240105IPR021914Transcriptional factor DELLA, N-terminal
SMARTSM011291.9E-3040117No hitNo description
PROSITE profilePS5098568.048173546IPR005202Transcription factor GRAS
PfamPF035147.2E-136199567IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    Send to blast
MKRDRDRRKT EAAAAAGSGS SSAGKAKMWA EQPQPDAGMD ELFAVLGYKM KSTDMADVAE  60
KLEQLEMAMG STMEDGASVL SNDTVHYNPS DLSGWVESML SELGSSSNGF DLISGNQIGI  120
SGESNGYDDD LRAIPGGAIF SNKQKDDAVD LPESANKRTR SEFSDNGFLP AAAAAGDAAA  180
AAAALPVMLV DSQEAGVRLV HTLMACAEAV QQENMKLADA LVKHVGVLAV SQVGAMRKVA  240
TYFAEALARR IYKVSPPEPL DSSYSDVLQM HFYETGPYLK FAHFTANQAI LEAFAGADRV  300
HVIDFSLKQG MQWPALMQAL ALRPGGPPAF RLTGVGPPQP DNTDALQQVG WKLAQLAETI  360
GVEFEFRGFV ANSLADLDAN MLGIRAGGEE AVAVNSVFEL HRLLSRPGAL EKVLNSIRAM  420
NPKIVTVVEQ EANHNGGVFL DRFNEALHYY STMFDSLESC GGVTQQLPPN GGQDLVMTEV  480
YLGRQICNVV ACDGADRVER HETLPQWRRR MGSAGFEPAH LGSNAHKQAS MLLALFAGGD  540
GYRVEENEGC LMLGWHTRPL IATSAWRLTA VG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A9e-6720656626378Protein SCARECROW
5b3h_A7e-6720656625377Protein SCARECROW
5b3h_D7e-6720656625377Protein SCARECROW
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). Its degradation is not essential for germination. {ECO:0000250, ECO:0000269|PubMed:15347801}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00894.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838438.10.0PREDICTED: DELLA protein GAI-like
SwissprotQ7Y1B60.0GAI_SOLLC; DELLA protein GAI
TrEMBLA0A022S3E60.0A0A022S3E6_ERYGU; Uncharacterized protein
STRINGMigut.K00894.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21262462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein
Publications ? help Back to Top
  1. Nir I, et al.
    The Tomato DELLA Protein PROCERA Acts in Guard Cells to Promote Stomatal Closure.
    Plant Cell, 2017. 29(12): p. 3186-3197
    [PMID:29150547]