PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.K00805.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | AP2 | ||||||||
Protein Properties | Length: 216aa MW: 23920.7 Da PI: 7.1245 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.8 | 8.6e-16 | 96 | 147 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f +eeAa+a++ a+ k++g Migut.K00805.1.p 96 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFAMEEEAAEAYDIAAIKFRG 147 57****************988532...5************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 9.73 | 1 | 75 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.1E-5 | 25 | 81 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-9 | 27 | 76 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 6.4E-8 | 46 | 75 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.9E-10 | 96 | 147 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.9E-15 | 96 | 154 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 9.1E-16 | 97 | 153 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.3E-24 | 97 | 161 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 17.042 | 97 | 157 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MRFVHLIDQI SGYWQFSSGD AATDVVVRRW LKLYESSICN RFFCPGGYDK EDKAARAYDL 60 AALKYWGATA TTNFPILNYA KELEEMNSSG FSRGASIYRG VTRHHQQGRW QARIGRVAGN 120 KDLYLGTFAM EEEAAEAYDI AAIKFRGLNA RLKLSLESND MDDNLNHPSN TAAATQTTTN 180 ISFSTTVQPP GSSLYPYGVP FDTTAAAGAL FYHHC* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the regulation of floral organs size. {ECO:0000250, ECO:0000269|PubMed:15988559}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.K00805.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012844257.1 | 4e-83 | PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 | ||||
Swissprot | Q6PQQ3 | 2e-57 | AIL5_ARATH; AP2-like ethylene-responsive transcription factor AIL5 | ||||
TrEMBL | A0A022QWJ5 | 2e-81 | A0A022QWJ5_ERYGU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65510.1 | 8e-52 | AINTEGUMENTA-like 7 |
Link Out ? help Back to Top | |
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Phytozome | Migut.K00805.1.p |
Publications ? help Back to Top | |||
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