PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00738.1.p
Common NameLOC105956274, MIMGU_mgv1a002424mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 678aa    MW: 76448.3 Da    PI: 6.821
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00738.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.71.1e-192277156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +++ +++t+eq+++Le++++++++p++++r++L+++lgL+++q+k+WFqN+R++ k
  Migut.K00738.1.p 22 KKQYHRHTTEQIQQLEAFYNECPHPDKNQRQQLSRELGLDQKQIKFWFQNKRTQTK 77
                      688999**********************************************9987 PP
2START137.41.5e-431954153206
                       HHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
             START   3 aeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                       a +a++el+ +  ++ep+W++ +       + +d +  +f++s+       + e +++sg v m ++ l e l+d++ +W+e ++    ka+t
  Migut.K00738.1.p 195 AVAAMNELMELLRVDEPLWFEAPsdhgrYTLRRDSYDMIFPKSNQvntssARFESSKDSGKVAMSATHLIEMLVDVN-KWKEFFPtivtKATT 286
                       7899*******************77776666677777777776669999999*************************.*************** PP

                       EEEECTT...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
             START  82 levissg...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                       le+i++g   g l+lm++++  lsplv+ R+f f+Ry+rq +  +wv+vdvS d  ++ + +s   R+ ++pSg++i++ sng+s+vtw+ehv
  Migut.K00738.1.p 287 LEAIDTGifgGLLHLMYQKMHILSPLVApREFFFIRYSRQINSSTWVLVDVSYDFITQLQ-DSVPTRSWRFPSGCIIQDISNGKSTVTWIEHV 378
                       ***************************99**************************99998.8999**************************** PP

                       E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                        ++++l  h l+r +v  ++a gak+w  tlqr ce+
  Migut.K00738.1.p 379 QVDDKLStHRLYRDFVCGSQAYGAKRWITTLQRMCER 415
                       *******9***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.8E-20773IPR009057Homeodomain-like
SuperFamilySSF466894.18E-181378IPR009057Homeodomain-like
PROSITE profilePS5007116.5521979IPR001356Homeobox domain
SMARTSM003893.6E-172183IPR001356Homeobox domain
CDDcd000866.38E-172277No hitNo description
PfamPF000463.2E-172277IPR001356Homeobox domain
PROSITE patternPS0002705477IPR017970Homeobox, conserved site
PROSITE profilePS5084842.417184418IPR002913START domain
SuperFamilySSF559612.61E-28188416No hitNo description
CDDcd088751.77E-92188414No hitNo description
SMARTSM002345.1E-28193415IPR002913START domain
PfamPF018523.6E-36195415IPR002913START domain
Gene3DG3DSA:3.30.530.202.2E-8251385IPR023393START-like domain
SuperFamilySSF559617.83E-10472670No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 678 aa     Download sequence    Send to blast
MDLSNRGNGS GDEENYNSEQ GKKQYHRHTT EQIQQLEAFY NECPHPDKNQ RQQLSRELGL  60
DQKQIKFWFQ NKRTQTKALN ERADNNSLRS ENERIHFENL SMHEALKNAF CPSCNSSGVC  120
EEEKRQNLQR LRIENARLKE EHERAVNFLT NYMGNSILPS VGTEPSTSAP GEQYMSQHWS  180
TSVTHVDQSV IIETAVAAMN ELMELLRVDE PLWFEAPSDH GRYTLRRDSY DMIFPKSNQV  240
NTSSARFESS KDSGKVAMSA THLIEMLVDV NKWKEFFPTI VTKATTLEAI DTGIFGGLLH  300
LMYQKMHILS PLVAPREFFF IRYSRQINSS TWVLVDVSYD FITQLQDSVP TRSWRFPSGC  360
IIQDISNGKS TVTWIEHVQV DDKLSTHRLY RDFVCGSQAY GAKRWITTLQ RMCERFAFSN  420
GLIATPTNEL EGVIESLEGK RNVMTLSQRM VESFFEVLCM SDKLDFPNPS EYQNSGVCVA  480
LRKSNGPHQP DGFIVSVATS LWLPFSKEHL FNFFHDEKRR ALWDVLSNGN PVTTVAHIST  540
GKHPGNRISI IQPFLPKENK MVVLQESSID SLGAAIIYAP MDLKALLSVV NGEDATKIPI  600
LPSGFVISTD GRASRGTNGA STSSNTGSGG SLLTVAFQIL ICHSQLTTQL NMESVATVHT  660
LISSTVKKIK ATLHYYD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00738.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835571.10.0PREDICTED: homeobox-leucine zipper protein HDG11-like
RefseqXP_012835572.10.0PREDICTED: homeobox-leucine zipper protein HDG11-like
TrEMBLA0A022RG260.0A0A022RG26_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10211732
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0homeodomain GLABROUS 11