PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00502.1.p
Common NameMIMGU_mgv1a003371mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CPP
Protein Properties Length: 581aa    MW: 62839.4 Da    PI: 7.8767
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00502.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR42.41.4e-13125164241
               TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                       ++k+CnCk+s+Clk+YCeCfa+g+ C   C+C +C+N+++
  Migut.K00502.1.p 125 KQKQCNCKHSRCLKLYCECFASGSVCCPGCNCVNCHNNDS 164
                       89***********************************986 PP
2TCR51.42.1e-16210249140
               TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                       k++kgC+Ckks ClkkYCeCf+a+  Cse+CkC dCkN e
  Migut.K00502.1.p 210 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCIDCKNYE 249
                       589***********************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.3E-13124165IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163436.086125250IPR005172CRC domain
PfamPF036382.5E-10126162IPR005172CRC domain
SMARTSM011142.5E-20210251IPR033467Tesmin/TSO1-like CXC domain
PfamPF036388.9E-13213248IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    Send to blast
MEQREGGDFP PKNQPPPQSE ASSTAPADFP ARKLVRQLDF TGFSGGAAAS TVEQPQLAKP  60
PPPPTTQKQT HLQPPTQMLF TAMQQPPPPA APPAHPFMRS VAKPESPRAR PRQNTNEVKD  120
ATPKKQKQCN CKHSRCLKLY CECFASGSVC CPGCNCVNCH NNDSNKAARD EAVNTTLERN  180
PHAFRPKIAS SPHGARDIRE EVGEVLVSAK HNKGCHCKKS GCLKKYCECF QANILCSENC  240
KCIDCKNYEG SEERQALFHG DHVNNMMYIQ QAANAAITGA IGSSGYGSPP LTKKRKNQEL  300
FFGSTVKDPV HRLTQLQQQA NQIKASVSSS SLSSIPGSRP GNTSVLSPSK LTYRSLLADI  360
IQPKDLKELC SVLVVYSGEA AKMLAEEKLA EDSRETSSFE NQTEKNKNVE SGSDEVPKGR  420
PMSPSTLALM CDEGDTIMFD TTNANSAAST NGVAVHNNNN SNNNNVSSQL SDEQGPSEAY  480
SEQERIVLTK FRDCLYRLIT LGEIKETNSL ARTQTANENE LTRTLNVKTE TLSNGVPKFA  540
SSSSLSAVVN LAEGAADNVA SLKITGPENG DVRKKPEGEL *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A2e-271172592132Protein lin-54 homolog
5fd3_B2e-271172592132Protein lin-54 homolog
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00045PBMTransfer from AT4G29000Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00502.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842740.10.0PREDICTED: protein tesmin/TSO1-like CXC 5
SwissprotQ9SZD11e-160TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
TrEMBLA0A022QZC10.0A0A022QZC1_ERYGU; Uncharacterized protein
STRINGMigut.K00502.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24012455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.11e-150Tesmin/TSO1-like CXC domain-containing protein