PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00249.1.p
Common NameLOC105976526, MIMGU_mgv1a019347mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 143aa    MW: 15808.5 Da    PI: 9.513
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00249.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00015476123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C++C++ F ++  L  H++ H
  Migut.K00249.1.p 54 FSCNYCKRKFYSSQALGGHQNAH 76
                      89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.19E-65181No hitNo description
PROSITE profilePS5015711.0745481IPR007087Zinc finger, C2H2
PROSITE patternPS0002805676IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MNYNNNNNYE ANTCLNLSLS SPNYTINHPF VNLTLVEGGP SSPPPSNQME TRVFSCNYCK  60
RKFYSSQALG GHQNAHKLER TLAKKSREAG SNNPGQGSVP GRVIGPDHHA GRFGRRDHIA  120
ADDQKRHVHQ EELAKLDLSL RL*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of floral organ abscission. Participates in processes that directly or indirectly influence shedding of floral organs. {ECO:0000269|PubMed:18192438}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00249.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857216.11e-103PREDICTED: zinc finger protein 2-like
SwissprotQ392611e-20ZFP2_ARATH; Zinc finger protein 2
TrEMBLA0A022Q3211e-101A0A022Q321_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA88762128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.15e-22zinc finger protein 2