PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.K00228.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 196aa MW: 23253.4 Da PI: 7.8528 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57 | 3.2e-18 | 81 | 133 | 2 | 54 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 rk+ ++t++q++ Le+ F++++++++++++ LA+kl++++rqV vWFqNrRa Migut.K00228.1.p 81 RKKMRLTRDQTTLLEDSFRQHSTLTTAQKQALAEKLNVKTRQVEVWFQNRRAW 133 78899**********************************************95 PP | |||||||
2 | HD-ZIP_I/II | 102.6 | 3.4e-33 | 81 | 172 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk rl+++q +lLE+sF+++++L++ +K++la++L++++rqv+vWFqnrRA tk+kq+E d+++Lk+++++l+een+rL+ke eLr+ +k Migut.K00228.1.p 81 RKKMRLTRDQTTLLEDSFRQHSTLTTAQKQALAEKLNVKTRQVEVWFQNRRAWTKLKQTEADFQFLKKTWERLMEENCRLKKELIELRSYIK 172 69*************************************************************************************98775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.1E-16 | 63 | 134 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 4.6E-16 | 68 | 138 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 15.904 | 77 | 137 | IPR001356 | Homeobox domain |
SMART | SM00389 | 8.5E-12 | 80 | 141 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 2.1E-15 | 81 | 134 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.94E-12 | 81 | 132 | No hit | No description |
PROSITE pattern | PS00027 | 0 | 112 | 135 | IPR017970 | Homeobox, conserved site |
SMART | SM00340 | 7.3E-7 | 137 | 181 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MDEHDDQYCN TTLGLGLNPY EPKREDQKKV KPMLFLDLSI SRHPDDLRII DSSLSLNLFE 60 NYEKESENKE YDSNSYKNCS RKKMRLTRDQ TTLLEDSFRQ HSTLTTAQKQ ALAEKLNVKT 120 RQVEVWFQNR RAWTKLKQTE ADFQFLKKTW ERLMEENCRL KKELIELRSY IKIETPPPPP 180 PPCFFRLPYC EGPEA* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.K00228.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. | |||||
UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012857274.1 | 1e-143 | PREDICTED: homeobox-leucine zipper protein HOX19-like | ||||
Swissprot | A2XE76 | 2e-34 | HOX19_ORYSI; Homeobox-leucine zipper protein HOX19 | ||||
Swissprot | Q8GRL4 | 2e-34 | HOX19_ORYSJ; Homeobox-leucine zipper protein HOX19 | ||||
TrEMBL | A0A022Q2Z6 | 6e-71 | A0A022Q2Z6_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16139 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22800.1 | 2e-32 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.K00228.1.p |