PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.J01847.1.p | ||||||||
Common Name | LOC105955167, MIMGU_mgv1a024232mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 255aa MW: 28587.8 Da PI: 8.503 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.4 | 2.5e-18 | 103 | 157 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Le+ F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k Migut.J01847.1.p 103 RKKLRLTKEQSAFLEDSFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTK 157 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 127.2 | 7.2e-41 | 103 | 191 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq+++LE+sF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en++L+ke +eL+ + Migut.J01847.1.p 103 RKKLRLTKEQSAFLEDSFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCETLTQENKKLHKELSELK-A 191 69*************************************************************************************9.4 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.3E-18 | 81 | 156 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.75E-19 | 91 | 160 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.248 | 99 | 159 | IPR001356 | Homeobox domain |
SMART | SM00389 | 2.0E-16 | 101 | 163 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 9.6E-16 | 103 | 157 | IPR001356 | Homeobox domain |
CDD | cd00086 | 8.32E-15 | 103 | 160 | No hit | No description |
PROSITE pattern | PS00027 | 0 | 134 | 157 | IPR017970 | Homeobox, conserved site |
Gene3D | G3DSA:1.20.5.170 | 6.3E-4 | 157 | 203 | No hit | No description |
SMART | SM00340 | 5.1E-19 | 159 | 202 | IPR003106 | Leucine zipper, homeobox-associated |
Pfam | PF02183 | 1.1E-10 | 159 | 192 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MEINLKRNEE AILLQGASNN NNNSSSSPNS STVSSFQMNF SVFRPNSAIS RKRGFEKIAE 60 NNNNINSCEL LGEADRIRGS DDDNDNDNDE DEINGNNNNN MSRKKLRLTK EQSAFLEDSF 120 KEHNTLNPKQ KVALAKQLNL RPRQVEVWFQ NRRARTKLKQ TEVDCEYLKR WCETLTQENK 180 KLHKELSELK ALNSHPNSFF MQLPPTTLTM CPSCERVAPT TAAAAQSPVT ATTAAASKHF 240 SLSPSHIAHA QHAS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 101 | 107 | SRKKLRL |
2 | 151 | 159 | RRARTKLKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.J01847.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012834323.1 | 0.0 | PREDICTED: homeobox-leucine zipper protein HAT14 | ||||
Swissprot | P46665 | 2e-69 | HAT14_ARATH; Homeobox-leucine zipper protein HAT14 | ||||
TrEMBL | A0A022RJQ5 | 0.0 | A0A022RJQ5_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA290 | 24 | 186 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 2e-65 | homeobox from Arabidopsis thaliana |
Link Out ? help Back to Top | |
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Phytozome | Migut.J01847.1.p |
Entrez Gene | 105955167 |