PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01780.1.p
Common NameLOC105949379, MIMGU_mgv1a011288mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 288aa    MW: 32346.1 Da    PI: 7.1818
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01780.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-192978255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  Migut.J01780.1.p 29 EYRGVRQRT-WGKWVAEIREPKK---RARLWLGSFATAEEAAMAYDEAARRLYG 78
                      69****999.**********965...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.90E-312888No hitNo description
PROSITE profilePS5103222.6162986IPR001471AP2/ERF domain
PfamPF008473.4E-132978IPR001471AP2/ERF domain
SuperFamilySSF541714.45E-212987IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.3E-302987IPR001471AP2/ERF domain
SMARTSM003801.6E-352992IPR001471AP2/ERF domain
PRINTSPR003673.4E-103041IPR001471AP2/ERF domain
PRINTSPR003673.4E-105268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MENCRKSPLK PWKKGPARGK GGPQNATCEY RGVRQRTWGK WVAEIREPKK RARLWLGSFA  60
TAEEAAMAYD EAARRLYGPE AYLNLPHLRS NFNPLNKSHK FKWFPSNSNS NSNNLVSMFP  120
TTGLLNLNAQ PSVHVIHQRL QELKKTGVFG LDSSSSSSSA PKKDVQSVEI LEKEKKDNEI  180
TSGVKAVTSE EKPQIDLNEF LQQLGVLKRD EHQTCVSDVS KSFTEIESLS SFRDDEDGFC  240
NYAEKNFNWD TLSEIGGADI HVGAESSTYQ VHDSNEELVF SPSIWNF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-193086360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity-inducible transcription. {ECO:0000269|PubMed:11798174}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00411DAPTransfer from AT3G57600Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01780.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By high-salt stress. {ECO:0000269|PubMed:11798174}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1825740.0AC182574.2 Erythranthe guttata clone MGBa-83E5, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828133.10.0PREDICTED: dehydration-responsive element-binding protein 2F
SwissprotQ9SVX52e-88DRE2F_ARATH; Dehydration-responsive element-binding protein 2F
TrEMBLA0A022PWY70.0A0A022PWY7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA70982329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.17e-77ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]