PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01509.1.p
Common NameLOC105958122, MIMGU_mgv1a018868mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 158aa    MW: 17990.5 Da    PI: 9.9782
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01509.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.31.3e-181569256
                      T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      rk+ +++++q++ Le+ F+++ ++++ +++ LA+kl+L+ rqV vWFqNrRa+ k
  Migut.J01509.1.p 15 RKKLRLNRDQTTLLEDSFRQHTTLNTVQKQALAEKLNLKPRQVEVWFQNRRARTK 69
                      788899***********************************************98 PP
2HD-ZIP_I/II108.64.4e-3515106192
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       +kk+rl+++q +lLE+sF+++++L++ +K++la++L+l+prqv+vWFqnrRARtk+kq+E+d e+Lk+++++l+een rL+ke  eLr++lk
  Migut.J01509.1.p  15 RKKLRLNRDQTTLLEDSFRQHTTLNTVQKQALAEKLNLKPRQVEVWFQNRRARTKLKQTEVDKEFLKKNCERLSEENWRLKKELLELRASLK 106
                       69**************************************************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.07E-17772IPR009057Homeodomain-like
PROSITE profilePS5007116.4551171IPR001356Homeobox domain
SMARTSM003895.9E-131375IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.2E-161569IPR009057Homeodomain-like
PfamPF000467.6E-161569IPR001356Homeobox domain
CDDcd000867.71E-121572No hitNo description
PROSITE patternPS0002704669IPR017970Homeobox, conserved site
SMARTSM003409.5E-1271115IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MIDDHSMNCS MDFSRKKLRL NRDQTTLLED SFRQHTTLNT VQKQALAEKL NLKPRQVEVW  60
FQNRRARTKL KQTEVDKEFL KKNCERLSEE NWRLKKELLE LRASLKIEKP PPPPPPAAAA  120
AAPLRCFNHN KNGAASREEG RGGGEKEEAA VMEEGGP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11319SRKKLRL
26371RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01509.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837577.11e-112PREDICTED: homeobox-leucine zipper protein HOX17-like
SwissprotA2XE764e-41HOX19_ORYSI; Homeobox-leucine zipper protein HOX19
SwissprotQ8GRL44e-41HOX19_ORYSJ; Homeobox-leucine zipper protein HOX19
TrEMBLA0A022RC481e-110A0A022RC48_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1613945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.16e-39homeobox from Arabidopsis thaliana