PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01452.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 159aa    MW: 17577.5 Da    PI: 9.7062
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01452.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.000795880123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C+ C + F ++  L  H++ H
  Migut.J01452.1.p 58 FSCNFCRRKFYSSQALGGHQNAH 80
                      89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.55E-65485No hitNo description
Gene3DG3DSA:3.30.160.609.9E-45899IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.8665885IPR007087Zinc finger, C2H2
PROSITE patternPS0002806080IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MNNNYEGNNT SLNLNPRKRS KVINLDLVLD PNNLSPVSSP TILSPPLSPM AAADQRVFSC  60
NFCRRKFYSS QALGGHQNAH KLERTLAKKS RELSSPVVRP HSGSNRPGSS YDPFYGFNTG  120
RVGRNDPNYG WINGGDEYNM SSSTHQEEHG QLDLSLRL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01452.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831246.11e-114PREDICTED: zinc finger protein 2
TrEMBLA0A022RR431e-100A0A022RR43_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA88762128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.18e-24zinc finger protein 2