PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.J01283.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ZF-HD | ||||||||
Protein Properties | Length: 114aa MW: 13061.6 Da PI: 6.2223 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 48.4 | 2.2e-15 | 4 | 50 | 5 | 58 |
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +Y eC k h +l g DGC Efmp+ + + l Ca CgCHR +HR+ e Migut.J01283.1.p 4 KYGECNKSHE-EL-GRGKDGCLEFMPN-----SYSPLDCAVCGCHRTYHRKVIE 50 7******995.44.6789********8.....6789***************875 PP | |||||||
2 | ZF-HD_dimer | 50.4 | 5e-16 | 54 | 107 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +v+Y C++ h + + DGC+Ef p++++ +aaal+CaACgCH+ FHR ev++ Migut.J01283.1.p 54 EVVYTYCKRFHYFT-KEDSWDGCQEFFPKNND--EAAALECAACGCHKAFHRDEVSK 107 78999999999765.5789*********9555..59****************99876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 1.4E-11 | 4 | 49 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 3.0E-7 | 4 | 56 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 15.768 | 5 | 48 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 2.4E-13 | 55 | 105 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 13.975 | 57 | 104 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence Send to blast |
MEDKYGECNK SHEELGRGKD GCLEFMPNSY SPLDCAVCGC HRTYHRKVIE LRTEVVYTYC 60 KRFHYFTKED SWDGCQEFFP KNNDEAAALE CAACGCHKAF HRDEVSKRVD STS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.J01283.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G9FY48 | 4e-30 | A0A2G9FY48_9LAMI; Uncharacterized protein | ||||
TrEMBL | A0A2G9FYB1 | 3e-30 | A0A2G9FYB1_9LAMI; Uncharacterized protein | ||||
STRING | Migut.J01283.1.p | 5e-80 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 2e-11 | mini zinc finger 2 |
Link Out ? help Back to Top | |
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Phytozome | Migut.J01283.1.p |