PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.J01282.1.p | ||||||||
Common Name | MIMGU_mgv1a021254mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ZF-HD | ||||||||
Protein Properties | Length: 110aa MW: 12401 Da PI: 5.4986 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 53.2 | 7.1e-17 | 4 | 50 | 5 | 57 |
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 +Y eC k hA +lGg+ +DGC+Ef+ s + + + l C CgCHRnFH + + Migut.J01282.1.p 4 KYLECHKSHA-NLGGK-IDGCQEFIWS-D---QNSMLDCDICGCHRNFHWKVE 50 79*******7.79997.8********9.3...3579*************9875 PP | |||||||
2 | ZF-HD_dimer | 28.2 | 4.6e-09 | 58 | 106 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +v+Y +C + ++vDGC++f+++ g+ l C AC C +FH +e Migut.J01282.1.p 58 EVVYTKCNNTRDFEFQ-TTVDGCQDFLSN-GR-----DLGCNACSCNMSFHQKEII 106 5677777766666664.579*******98.55.....59**************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 1.9E-13 | 4 | 49 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 9.0E-7 | 4 | 48 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 16.207 | 5 | 49 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 3.0E-7 | 59 | 105 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence Send to blast |
MGDKYLECHK SHANLGGKID GCQEFIWSDQ NSMLDCDICG CHRNFHWKVE APVVLVTEVV 60 YTKCNNTRDF EFQTTVDGCQ DFLSNGRDLG CNACSCNMSF HQKEIIVKQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.J01282.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012851804.1 | 3e-27 | PREDICTED: zinc-finger homeodomain protein 4-like | ||||
TrEMBL | A0A022Q9C1 | 1e-76 | A0A022Q9C1_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.J01282.1.p | 9e-77 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA19834 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18835.1 | 2e-12 | mini zinc finger |
Link Out ? help Back to Top | |
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Phytozome | Migut.J01282.1.p |