PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.J00902.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 167aa MW: 17858.9 Da PI: 9.501 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.4e-20 | 17 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +g+WvAe+r p++ r r++lg+++taeeAa+a++aa +l+g Migut.J00902.1.p 17 RYKGVRMRK-WGKWVAEVRQPNS---RDRIWLGSYDTAEEAARAYDAAVVCLRG 66 69*****99.*******888732...5************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 2.1E-35 | 17 | 80 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.27E-29 | 17 | 76 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.1E-30 | 17 | 75 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.301 | 17 | 74 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.75E-22 | 17 | 75 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.0E-13 | 17 | 66 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.0E-10 | 18 | 29 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.0E-10 | 40 | 56 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MVRPQSSSKR SERREGRYKG VRMRKWGKWV AEVRQPNSRD RIWLGSYDTA EEAARAYDAA 60 VVCLRGSSSV LNFPDDPPDI QVAASKHARR SAAPAVADVE LKQSLVGSLL LGEKADLGSS 120 SFGEFHGGGG GYLEAEERGR GGSAGAGGDD VIGGGVFFDT PRVWKF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-18 | 15 | 76 | 12 | 74 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.J00902.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012851158.1 | 7e-93 | PREDICTED: ethylene-responsive transcription factor ERF017-like | ||||
TrEMBL | A0A022QAY1 | 3e-58 | A0A022QAY1_ERYGU; Uncharacterized protein (Fragment) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 1e-18 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.J00902.1.p |