PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.J00695.1.p

Common Name

MIMGU_mgv1a018652mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Dof

Protein Properties

Length: 306aa MW: 32803.5 Da PI: 5.7867

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.J00695.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.7	9.1e-37	18	74	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 a +cprC s+ntkfCyynnysl+qPr+fCk+CrryWtkGG+lrnvPvGgg+rk +++ Migut.J00695.1.p 18 AAACPRCGSSNTKFCYYNNYSLTQPRFFCKGCRRYWTKGGSLRNVPVGGGCRKTRRR 74 679**************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	5.3E-31	19	73	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.239	19	73	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	21	57	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-24	21	73	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence Send to blast
MEREYWKSDD GGDASPPAAA CPRCGSSNTK FCYYNNYSLT QPRFFCKGCR RYWTKGGSLR 60 NVPVGGGCRK TRRRGQRTVT NPAGNIQSTT NSILSGGAAP HGDSTSIDLA AVYANFLNHH 120 HHNQQTPPPP PRQPPEIVIN DHLIPQLPPE GILNINPASI MEFSGFDHQA LNQQGFFECG 180 SPFITDHTRL MSESSASAPP PLLGCGSSMF FDGSFQKLPD AEGNNSFFIN GGSCLNSILP 240 PLPGEDLAAA AATSAASERM LWPDSDVVLP PSMHETTGDQ EAVEPGCGNL SPFSDGLNLE 300 AFFRS*

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00405	DAP	Transfer from AT3G52440	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.J00695.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012828638.1	0.0	PREDICTED: uncharacterized protein LOC105949880
TrEMBL	A0A022PQV6	0.0	A0A022PQV6_ERYGU; Uncharacterized protein
STRING	Migut.J00695.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12963	13	17

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	2e-41	Dof family protein

Link Out ? help Back to Top
Phytozome	Migut.J00695.1.p