PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00688.1.p
Common NameMIMGU_mgv1a017796mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NF-YA
Protein Properties Length: 318aa    MW: 34783.1 Da    PI: 10.2513
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00688.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA95.18.3e-30153207358
         CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       p++VN+KQy++I++RR+kRak+e +++l  k rkpylh+SRh hA+rRpRg+gGrF
  Migut.J00688.1.p 153 PIFVNPKQYSGIIRRRKKRAKAELQNRL-LKLRKPYLHHSRHLHAMRRPRGNGGRF 207
                       9***************************.**************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005212.6E-32149210IPR001289Nuclear transcription factor Y subunit A
PROSITE profilePS5115232.948150210IPR001289Nuclear transcription factor Y subunit A
PfamPF020458.6E-26153207IPR001289Nuclear transcription factor Y subunit A
PRINTSPR006161.2E-20153175IPR001289Nuclear transcription factor Y subunit A
PRINTSPR006161.2E-20184207IPR001289Nuclear transcription factor Y subunit A
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MHSVSCFLKE HEGVANGPLS AAVPLWNGLR SDQPPQLAYD QSKLANGHLF AARERSENRL  60
GNGIISTHFT LFSGDCKSNE NGDKAPLMQT VSSVVEAPTM DFRGHFELGF GQQMICGKYP  120
YAEQCYGVYS TYGSTQIAGR MMLPFSMASD GGPIFVNPKQ YSGIIRRRKK RAKAELQNRL  180
LKLRKPYLHH SRHLHAMRRP RGNGGRFLNT KNSGDTTKKS AGEKQLRQQN FGGSNESSSR  240
STSPGSEVTT SNDHGGYLFS TAVASAATTT TTINTDVQYP FQMNHVHRSF HQFTDRAVNT  300
APLGIAMAGS GGNYLKV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4g91_A3e-14153208460HAPB protein
4g92_A3e-14153208460HAPB protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165170RRRKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00688.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828635.10.0PREDICTED: nuclear transcription factor Y subunit A-10
TrEMBLA0A022PRH40.0A0A022PRH4_ERYGU; Uncharacterized protein
STRINGMigut.J00688.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37062347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.23e-36nuclear factor Y, subunit A10